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(蔷薇科)的完整叶绿体基因组序列。

The complete chloroplast genome sequence of (Rosaceae).

作者信息

Zhang Cheng, Xiong Xianhua, Gao Xinfen

机构信息

Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu, Sichuan, China.

University of Chinese Academy of Sciences, Beijing, China.

出版信息

Mitochondrial DNA B Resour. 2019 Oct 15;4(2):3556-3557. doi: 10.1080/23802359.2019.1674200.

Abstract

The complete chloroplast genome of has been characterized by reference-based assembly using Illumina paired-end data. The complete cp genome is 156,342 bp in length, containing a large single-copy region of 85,459 bp, a small single-copy region of 18,785 bp, which are separated by a pair of inverted repeat regions of 26,049 bp, a total of 140 genes were predicted from the cp genome, including 87 protein-coding genes, 39 tRNA genes, and 8 rRNA genes . Most genes occur as a single copy, while 19 gene species are duplicated. Phylogenetic analysis reveals that and f. are more closely related to each other than either is to var. .

摘要

已通过使用Illumina双端数据基于参考的组装对[物种名称]的完整叶绿体基因组进行了表征。完整的叶绿体基因组长度为156,342 bp,包含一个85,459 bp的大单拷贝区域、一个18,785 bp的小单拷贝区域,它们被一对26,049 bp的反向重复区域隔开,从叶绿体基因组中预测出总共140个基因,包括87个蛋白质编码基因、39个tRNA基因和8个rRNA基因。大多数基因以单拷贝形式存在,而19种基因是重复的。系统发育分析表明,[物种名称1]和[物种名称2] f. [变种名称]彼此之间的关系比它们与[物种名称3] var. [变种名称]的关系更为密切。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/13e3/7707283/8f963a325642/TMDN_A_1674200_F0001_B.jpg

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