• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

中国特有的濒危物种(苦苣苔科)的完整质体基因组。

Complete plastid genome of the endangered species (Gesneriaceae) endemic to China.

作者信息

Meng Jing, Zhang Linna, He Jun

机构信息

College of Horticulture and Landscape, Yunnan Agricultural University, Kunming, China.

Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China.

出版信息

Mitochondrial DNA B Resour. 2019 Oct 15;4(2):3585-3586. doi: 10.1080/23802359.2019.1677186.

DOI:10.1080/23802359.2019.1677186
PMID:33366096
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7707429/
Abstract

is a unique species of endemic to south-west China, which is a "100-years-lost" plant and was rediscovered in 2006. In this paper, complete plastid genome of is firstly assembled and characterized. The length of total plastid genome is 153,259 bp consisting of a large single-copy region (LSC) of 84,293 bp, a small single-copy region (SSC) of 18,162 bp, and two inverted repeat regions (IRs) of 25,402 bp. In total, 113 genes are predicted, including 80 protein-coding genes (PCGs), four rRNA genes and 29 tRNA genes. Phylogenetic analysis indicated that with the other eight Gesneriaceae species formed a clade with a 100% bootstrap support.

摘要

是中国西南地区特有的一个独特物种,它是一种“消失百年”的植物,于2006年被重新发现。在本文中,首次组装并表征了该物种的完整质体基因组。质体基因组全长153,259 bp,由一个84,293 bp的大单拷贝区域(LSC)、一个18,162 bp的小单拷贝区域(SSC)和两个25,402 bp的反向重复区域(IR)组成。总共预测了113个基因,包括80个蛋白质编码基因(PCG)、4个rRNA基因和29个tRNA基因。系统发育分析表明,该物种与其他8种苦苣苔科植物形成了一个具有100%自展支持率的分支。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/66d3/7707429/8453375d67bf/TMDN_A_1677186_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/66d3/7707429/8453375d67bf/TMDN_A_1677186_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/66d3/7707429/8453375d67bf/TMDN_A_1677186_F0001_B.jpg

相似文献

1
Complete plastid genome of the endangered species (Gesneriaceae) endemic to China.中国特有的濒危物种(苦苣苔科)的完整质体基因组。
Mitochondrial DNA B Resour. 2019 Oct 15;4(2):3585-3586. doi: 10.1080/23802359.2019.1677186.
2
Complete plastid genome sequence of the rare and endangered medicinal herb , endemic to China.中国特有的珍稀濒危药用植物的完整质体基因组序列
Mitochondrial DNA B Resour. 2019 Jul 12;4(2):2343-2344. doi: 10.1080/23802359.2019.1629348.
3
Characterization of the complete plastid genome of a Chinese endemic species .一种中国特有物种的完整质体基因组特征分析
Mitochondrial DNA B Resour. 2018 Apr 23;3(2):492-493. doi: 10.1080/23802359.2018.1464414.
4
Characterization of the complete plastid genome of (Caryophyllaceae), an endangered medical herb endemic to south-western China.中国西南部特有的濒危药用草本植物银柴胡(石竹科)完整质体基因组的特征分析
Mitochondrial DNA B Resour. 2019 Sep 2;4(2):2798-2799. doi: 10.1080/23802359.2019.1659120.
5
Development of 11 microsatellite loci for an endangered herb, Paraisometrum mileense (Gesneriaceae), in southwest China.开发 11 个微卫星标记用于研究中国西南濒危植物芒毛苣苔(苦苣苔科)
Appl Plant Sci. 2013 Jan 2;1(1). doi: 10.3732/apps.1200133. eCollection 2013 Jan.
6
The complete plastid genome of (Nartheciaceae), an endemic species from Yunnan Province of China.中国云南省特有物种(纳茜菜科)的完整质体基因组。
Mitochondrial DNA B Resour. 2021 Jan 27;6(1):293-294. doi: 10.1080/23802359.2020.1866459.
7
Characterization of the complete plastid genome of , an endemic tree species in China.中国特有树种[具体树种名称未给出]完整质体基因组的特征分析
Mitochondrial DNA B Resour. 2019 Nov 18;4(2):4065-4066. doi: 10.1080/23802359.2019.1689863.
8
The complete plastid genome sequence of (Plantaginaceae): an endangered species endemic to The Himalayas regions.(车前科)的完整质体基因组序列:一种喜马拉雅地区特有的濒危物种。
Mitochondrial DNA B Resour. 2019 Jul 16;4(2):2504-2505. doi: 10.1080/23802359.2019.1639560.
9
Characterization of the complete chloroplast genome of (Theaceae), an endemic and endangered species in southwestern China.中国西南地区特有濒危物种茶科(Theaceae)完整叶绿体基因组的特征分析
Mitochondrial DNA B Resour. 2021 Mar 11;6(3):814-815. doi: 10.1080/23802359.2021.1884013.
10
Characterization of the DNA molecular sequence of complete plastid genome of subsp. , an endemic species in China.中国特有物种[具体亚种名称]质体基因组全序列的DNA分子序列特征分析 。 (注:原文中“subsp.”后缺少具体亚种名称,翻译时用[具体亚种名称]表示)
Mitochondrial DNA B Resour. 2021 Aug 13;6(9):2628-2629. doi: 10.1080/23802359.2021.1917311. eCollection 2021.

引用本文的文献

1
The complete chloroplast genome of (Gesneriaceae) exclusively distributed in Guilin, Guangxi, China.(苦苣苔科)仅分布于中国广西桂林的[植物名称未给出]的完整叶绿体基因组。
Mitochondrial DNA B Resour. 2024 Mar 28;9(3):411-414. doi: 10.1080/23802359.2023.2294890. eCollection 2024.
2
Characterization of the complete plastid genome and phylogenetic analysis of var. (Gesneriaceae).紫萼凤仙花变种(凤仙花科)完整质体基因组的特征分析及系统发育分析
Mitochondrial DNA B Resour. 2023 Oct 27;8(10):1137-1140. doi: 10.1080/23802359.2023.2270207. eCollection 2023.
3
Plastomes of limestone karst gesneriad genera Petrocodon and Primulina, and the comparative plastid phylogenomics of Gesneriaceae.

本文引用的文献

1
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.MEGA7:适用于更大数据集的分子进化遗传学分析版本7.0
Mol Biol Evol. 2016 Jul;33(7):1870-4. doi: 10.1093/molbev/msw054. Epub 2016 Mar 22.
2
Taxonomic status, phylogenetic affinities and genetic diversity of a presumed extinct genus, Paraisometrum W.T. Wang (gesneriaceae) from the karst regions of Southwest China.中国西南喀斯特地区一种假定已灭绝的类群——文采木属(W.T. Wang)(苦苣苔科)的分类地位、系统发育亲缘关系及遗传多样性
PLoS One. 2014 Sep 24;9(9):e107967. doi: 10.1371/journal.pone.0107967. eCollection 2014.
3
Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data.
石灰岩喀斯特 gesneriad 属 Petrocodon 和 Primulina 的质体基因组,以及 Gesneriaceae 的比较质体系统基因组学。
Sci Rep. 2022 Sep 22;12(1):15800. doi: 10.1038/s41598-022-19812-2.
4
Complete chloroplast genome sequence of an endangered plant (Gesneriaceae) from Guangxi, China.中国广西一种濒危植物(苦苣苔科)的完整叶绿体基因组序列
Mitochondrial DNA B Resour. 2021 Sep 15;6(10):2936-2938. doi: 10.1080/23802359.2021.1973918. eCollection 2021.
5
The Complete Chloroplast Genome of the Vulnerable (Gesneriaceae): Structural Features, Comparative and Phylogenetic Analysis.濒危植物(苦苣苔科)的完整叶绿体基因组:结构特征、比较与系统发育分析
Plants (Basel). 2020 Dec 2;9(12):1692. doi: 10.3390/plants9121692.
Geneious Basic:一个集成和可扩展的桌面软件平台,用于组织和分析序列数据。
Bioinformatics. 2012 Jun 15;28(12):1647-9. doi: 10.1093/bioinformatics/bts199. Epub 2012 Apr 27.
4
Automatic annotation of organellar genomes with DOGMA.使用DOGMA对细胞器基因组进行自动注释。
Bioinformatics. 2004 Nov 22;20(17):3252-5. doi: 10.1093/bioinformatics/bth352. Epub 2004 Jun 4.