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(猩红栎)的首个完整叶绿体基因组及其在壳斗科中的系统发育位置。

The first complete chloroplast genome of (Scarlet Oak) and its phylogenetic position within Fagaceae.

作者信息

Yang Xuemei, Yin Yanlei, Feng Lijuan, Tang Haixia, Wang Fei

机构信息

Shandong Institute of Pomology, Shandong Academy of Agricultural Sciences, Taian, Shandong, People's Republic of China.

出版信息

Mitochondrial DNA B Resour. 2019 Oct 18;4(2):3634-3635. doi: 10.1080/23802359.2019.1677189.

Abstract

is a native to North America, which grows well in acidic soil and resists cold to extreme low temperature -40 °C. The chloroplast (cp) genome of , sequenced based on next-generation platform (NEOSAT), is 161,298 bp in size. The cp genome encodes 133 genes, including 88 protein-coding genes (PCGs), 8 rRNA genes, and 37 tRNA genes. Phylogenetic relationship analysis based on complete cp genome sequences exhibited that both of and were phylogenetically closer to var. .

摘要

原产于北美,在酸性土壤中生长良好,能抵御低温至极端低温-40°C。基于下一代平台(NEOSAT)测序的其叶绿体(cp)基因组大小为161,298 bp。该cp基因组编码133个基因,包括88个蛋白质编码基因(PCG)、8个rRNA基因和37个tRNA基因。基于完整cp基因组序列的系统发育关系分析表明,[物种名称1]和[物种名称2]在系统发育上都与[变种名称]更接近。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba0d/7707449/ba4f18e9d04a/TMDN_A_1677189_F0001_B.jpg

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