药用植物的叶绿体全基因组序列及系统发育分析

The complete chloroplast genome sequence and phylogenetic analysis of the medicinal plant .

作者信息

Ying Zhiqi, Wang Qirui, Yu Shuisheng, Liao Guanghui, Ge Yuqing, Cheng Rubin

机构信息

College of Pharmaceutical Science, Zhejiang Chinese Medical University, Hangzhou, China.

The Administration Bureau of Zhejiang, Jiulongshan National Nature Reserve, Suichang, China.

出版信息

Mitochondrial DNA B Resour. 2019 Nov 8;4(2):3878-3879. doi: 10.1080/23802359.2019.1688115.

DOI:10.1080/23802359.2019.1688115

PMID:33366231

原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7707760/

Abstract

is an important medical plant in the Family Primulaceae. In this study, we determined the complete chloroplast genome of It is 155,618 bp in length, containing a large single copy (LSC) region of 85,615 bp, a small single copy (SSC) region of 17,861 bp, which were separated by a pair of inverted repeat (IR) regions of 26,071bp. The complete chloroplast genome of encoded a total of 134 genes, including 89 protein-coding genes with the pseudogene of ycf1, 8 ribosomal RNA genes and 37 transfer RNA genes. Phylogenetic analysis revealed that was most closely related to the Korea endemic plant with high bootstrap support value. This work provides basic molecular information that would be useful for further investigation on conservation genetics and evolutionary relationships of .

摘要

是报春花科一种重要的药用植物。在本研究中，我们测定了其完整的叶绿体基因组。它的长度为155,618 bp，包含一个85,615 bp的大单拷贝（LSC）区域、一个17,861 bp的小单拷贝（SSC）区域，这两个区域被一对26,071 bp的反向重复（IR）区域隔开。该植物完整的叶绿体基因组共编码134个基因，包括89个蛋白质编码基因（其中ycf1为假基因）、8个核糖体RNA基因和37个转移RNA基因。系统发育分析表明，该植物与韩国特有植物关系最为密切，自展支持值较高。这项工作提供了基础分子信息，将有助于对该植物的保护遗传学和进化关系进行进一步研究。