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药用植物苎麻(Boehmeria nivea (L.) Gaud.)的叶绿体全基因组序列及其与荨麻科其他物种的系统发育关系。

Complete chloroplast genome sequence of the medicinal plant ramie ( L. gaud) and its phylogenetic relationship to other Urticaceae species.

作者信息

He Xiangyu, Zheng Zihong, Wang Qirui, Zhou Manjia, Liao Guanghui, Ge Yuqing, Cheng Rubin

机构信息

College of Pharmaceutical Science, Zhejiang Chinese Medical University, Hangzhou, China.

The Administration Bureau of Zhejiang, Jiulongshan National Nature Reserve, Suichang.

出版信息

Mitochondrial DNA B Resour. 2021 Mar 22;6(3):1136-1137. doi: 10.1080/23802359.2021.1878959.

Abstract

Ramie ( L. Gaud) is a traditional fiber crop and important medicinal plant belonging to the family Urticaceae. In this study, we determine the complete chloroplast genome sequence of . The assembled chloroplast genome is 156065 bp in length and shares the conserved quadripartite structure as other cp genomes in . The genome contains 131 genes, including 84 protein genes, 8 rRNA genes, 37 tRNA genes and 2 pseudo genes. There are 17 duplicated genes in the IR region. The overall GC content of is 36.33%, with the highest GC content of 42.72% in IR region. A total of 67 simple sequence repeats are identified in the cp genome of . Phylogenetic analysis demonstrated that clustered together with further forming a monophyletic group with the species of Debregeasia and Pipturus. This work provides basic genetic resources for developing robust markers and investigating the population genetics diversities for

摘要

苎麻(L. Gaud)是一种传统纤维作物,也是荨麻科重要的药用植物。在本研究中,我们测定了……的完整叶绿体基因组序列。组装后的叶绿体基因组长度为156065 bp,与……中的其他叶绿体基因组一样具有保守的四分体结构。该基因组包含131个基因,包括84个蛋白质基因、8个rRNA基因、37个tRNA基因和2个假基因。IR区域有17个重复基因。……的总体GC含量为36.33%,IR区域的GC含量最高,为42.72%。在……的叶绿体基因组中总共鉴定出67个简单序列重复。系统发育分析表明,……与……聚集在一起,进一步与水麻属和紫麻属的物种形成一个单系类群。这项工作为开发强大的标记和研究……的群体遗传多样性提供了基础遗传资源。

需注意,原文中部分内容缺失具体物种名称,翻译时用“……”进行了标注。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/600c/7995820/2ccc9e6f503f/TMDN_A_1878959_F0001_B.jpg

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