Sun Chong, Gong Xia, Liu Xia
College of Landscape Architecture and Life Science, Chongqing University of Arts and Sciences, Chongqing, China.
Sichuan Academy of Botanical Engineering, Sichuan, China.
Mitochondrial DNA B Resour. 2020 Jun 4;5(3):2332-2334. doi: 10.1080/23802359.2020.1773344.
plays an important ecological role in boreal and temperate forests, serving as wildlife habitats and watersheds. The complete chloroplast genome sequence of was characterized from Illumina pair-end sequencing. The chloroplast genome of was 155,325 bp in length, containing a large single-copy region (LSC) of 84,679 bp, a small single-copy region (SSC) of 16,862 bp, and two inverted repeat (IR) regions of 26,892 bp. The overall GC content is 36.80%, while the corresponding values of the LSC, SSC, and IR regions are 34.5%, 30.5%, and 42.5%, respectively. The genome contains 131 complete genes, including 86 protein-coding genes (62 protein-coding gene species), 37 tRNA genes (29 tRNA species), and 8 rRNA genes (4 rRNA species). The neighbour-joining phylogenetic analysis showed that and clustered together as sisters to other species.
在北方和温带森林中发挥着重要的生态作用,作为野生动物栖息地和集水区。通过Illumina双端测序对其完整叶绿体基因组序列进行了表征。其叶绿体基因组长度为155,325 bp,包含一个84,679 bp的大单拷贝区域(LSC)、一个16,862 bp的小单拷贝区域(SSC)和两个26,892 bp的反向重复(IR)区域。总体GC含量为36.80%,而LSC、SSC和IR区域的相应值分别为34.5%、30.5%和42.5%。该基因组包含131个完整基因,包括86个蛋白质编码基因(62种蛋白质编码基因)、37个tRNA基因(29种tRNA)和8个rRNA基因(4种rRNA)。邻接法系统发育分析表明,它与其他物种聚在一起,形成姐妹关系。