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(鲈形目:阿氏南极鱼科)线粒体全基因组的特征分析

Characterization of complete mitochondrial genome of (Perciformes: Artedidraconidae).

作者信息

Tabassum Nazia, Alam Md Jobaidul, Kim Jeong-Hoon, Lee Soo Rin, Lee Ji-Hyun, Park Hyun, Kim Hyun-Woo

机构信息

Interdisciplinary Program of Biomedical, Mechanical and Electrical Engineering, Pukyong National University, Busan, Republic of Korea.

Korea Polar Research Institute, Korea Ocean Research and Development Institute, Incheon, Republic of Korea.

出版信息

Mitochondrial DNA B Resour. 2019 Dec 12;5(1):156-157. doi: 10.1080/23802359.2019.1698361.

DOI:10.1080/23802359.2019.1698361
PMID:33366465
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7720972/
Abstract

The complete mitochondrial genome of was determined by the MiSeq platform, which was the first report in the family Artedidraconidae. The circular form of its mitochondrial genome was 17,086 bp, which contained the canonical eukaryotic 37 genes. The gene orders of was identical to the other icefish species, in which there was additional non-coding region and translocation of ND6 gene. Except for ATP6 gene and COI (GTG), 11 genes begin with the typical start codon, while incomplete stop codons (T- -) were identified in COII, ND4, and CytB. Phylogenetic tree with the currently known mitogenomes in suborder Notothenioidei showed that was located distinctly from those in Bathydraconidae and Nototheniidae forming a unique cluster as Artedidraconidae. The first complete mitochondrial genome of would be the fundamental data to understand the evolutional relationship of icefish species in the Antarctic Oceans.

摘要

通过MiSeq平台测定了[物种名称]的完整线粒体基因组,这是阿氏龙科的首次报道。其线粒体基因组呈环状,长度为17,086 bp,包含典型的真核生物37个基因。[物种名称]的基因顺序与其他冰鱼物种相同,其中存在额外的非编码区和ND6基因的易位。除ATP6基因和COI(GTG)外,11个基因以典型的起始密码子开始,而在COII、ND4和CytB中鉴定出不完全终止密码子(T - -)。基于亚目南极鱼亚目中目前已知的有丝分裂基因组构建的系统发育树表明,[物种名称]与南极龙科和南极鱼科的物种明显分开,形成了作为阿氏龙科的独特聚类。[物种名称]的首个完整线粒体基因组将是了解南极海洋冰鱼物种进化关系的基础数据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0a9f/7720972/610d2e0f7779/TMDN_A_1698361_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0a9f/7720972/610d2e0f7779/TMDN_A_1698361_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0a9f/7720972/610d2e0f7779/TMDN_A_1698361_F0001_B.jpg

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