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褐梭子鱼(鲈形目:魣科)线粒体全基因组特征分析

Characterization of the complete mitochondrial genome of brown barracuda, (Perciformes: Sphyraenidae).

作者信息

Tabassum Nazia, Park Wongyu, Baek Hae-Ja, Je Jae-Young, Kim Hyun-Woo

机构信息

Industrial Convergence Bionix Engineering, Pukyong National University, Busan, Republic of Korea.

Department of Marine Biology, Pukyong National University, Busan, Republic of Korea.

出版信息

Mitochondrial DNA B Resour. 2020 Jul 28;5(3):3042-3043. doi: 10.1080/23802359.2020.1797588.

DOI:10.1080/23802359.2020.1797588
PMID:33458050
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7782257/
Abstract

The entire mitochondrial genome sequence of collected from Korean water was determined by the Next Generation Sequencing (NGS) technology. Its total length was 16,620 bps in length, which possessed the canonical 37 genes in the eukaryotes. Unusual start codon was exclusively found in COX1(GTG), while incomplete stop codons (TA-/T-) were identified in ATP6, COX2, ND3, ND4, and Cyt b. A phylogenetic analysis with currently identified full mitogenomes in Perciformes, was most closely related to S. (76.87%) and S. (76.84%). This mitogenome sequence would explain the evolution of genus .

摘要

通过下一代测序(NGS)技术测定了从韩国水域采集的样本的完整线粒体基因组序列。其全长为16,620个碱基对,拥有真核生物中典型的37个基因。在COX1中仅发现异常起始密码子(GTG),而在ATP6、COX2、ND3、ND4和Cyt b中鉴定出不完整的终止密码子(TA-/T-)。与目前已鉴定的鲈形目完整线粒体基因组进行的系统发育分析表明,该样本与某物种(76.87%)和另一物种(76.84%)关系最为密切。该线粒体基因组序列将解释某属的进化情况。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fd3a/7782257/f6325d4665df/TMDN_A_1797588_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fd3a/7782257/f6325d4665df/TMDN_A_1797588_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fd3a/7782257/f6325d4665df/TMDN_A_1797588_F0001_B.jpg

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