Liu Bingjian, Liu Yifan, Zhu Kehua, Liu Liqin, Jiang Lihua, Gong Li, Liu Zhu, Zhang Weinan, Duan Wen, Lü Zhenming
National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, Zhoushan, PR China.
Laboratory for Marine Fisheries Science and Food Production Processes, Qingdao National Laboratory for Marine Science and Technology, Qingdao, PR China.
Mitochondrial DNA B Resour. 2018 Oct 29;3(2):1025-1026. doi: 10.1080/23802359.2018.1511844.
The complete mitogenome of was sequenced, which is a closed double-stranded circular molecule of 16,506 bp, and we analyzed the main features in terms of the genome organization, gene arrangement, and codon usage. The overall base composition includes C(28.5%), A(27.2%), T(26.7%), and G(17.6%). Moreover, the 13 protein-coding genes encode 3797 amino acids in total, 12 of which use the initiation codon ATG except COI uses GTG. Most of them have TAA as the stop codon, whereas ND3 ends with TAG, and three protein-coding genes (COII, ND4, and Cytb) use ended with the incomplete stop codon represented as a single T. The phylogenetic tree based on the neighbour-joining method was conducted, using a concatenated set of 12 protein-coding genes, and adding nine other species of Perciformes, which could be a useful basis for management of this species.
对[物种名称]的完整线粒体基因组进行了测序，其为一个16506 bp的闭合双链环状分子，我们从基因组结构、基因排列和密码子使用方面分析了其主要特征。总体碱基组成为：C（28.5%）、A（27.2%）、T（26.7%）和G（17.6%）。此外，13个蛋白质编码基因共编码3797个氨基酸，其中12个使用起始密码子ATG，除COI使用GTG。它们大多以TAA作为终止密码子，而ND3以TAG结尾，三个蛋白质编码基因（COII、ND4和Cytb）以单个T表示的不完整终止密码子结束。基于邻接法构建了系统发育树，使用了一组串联的12个蛋白质编码基因，并添加了其他9种鲈形目物种，这可为该物种的管理提供有用依据。
