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.的完整线粒体基因组序列

The complete mitochondrial genome sequence of .

作者信息

Jiang Weiling, Yu Xiaolei, Zhang Huanyu, Wang Yu, Tian Xiaoxuan

机构信息

Tianjin State Key Laboratory of Modern Chinese Medicine, Tianjin University of Traditional Chinese Medicine, Tianjin, China.

出版信息

Mitochondrial DNA B Resour. 2019 Dec 12;5(1):184-185. doi: 10.1080/23802359.2019.1698378.

DOI:10.1080/23802359.2019.1698378
PMID:33366478
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7748638/
Abstract

has been intensively studied since it can cause serious damage to cucurbits. Here, we reported the complete mitochondrial genome of for the first time. The mitochondrial genome is 15,730 bp in length and contained 13 protein-coding genes (PCGs), 2 rRNAs, 22 tRNAs, and an AT-rich control region. Phylogenetic tree indicated that is more closely related to than other Galerucinae beetles.

摘要

由于它会对葫芦科植物造成严重损害,因此受到了深入研究。在此,我们首次报道了[物种名称]的完整线粒体基因组。线粒体基因组长度为15,730 bp,包含13个蛋白质编码基因(PCGs)、2个rRNA、22个tRNA和一个富含AT的控制区域。系统发育树表明,[物种名称]与[另一物种名称]的关系比其他叶甲亚科甲虫更为密切。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/757c/7748638/b6373a508aef/TMDN_A_1698378_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/757c/7748638/b6373a508aef/TMDN_A_1698378_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/757c/7748638/b6373a508aef/TMDN_A_1698378_F0001_B.jpg

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本文引用的文献

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Mitochondrial DNA A DNA Mapp Seq Anal. 2018 Oct;29(7):1041-1050. doi: 10.1080/24701394.2017.1404044. Epub 2017 Nov 30.
2
tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes.tRNAscan-SE在线工具:整合搜索与上下文以分析转运RNA基因
Nucleic Acids Res. 2016 Jul 8;44(W1):W54-7. doi: 10.1093/nar/gkw413. Epub 2016 May 12.
3
Revision of the genus Aulacophora from Taiwan (Coleoptera: Chrysomelidae: Galerucinae).
台湾龟金花虫属修订(鞘翅目:叶甲科:龟金花虫亚科)
Zootaxa. 2015 Apr 24;3949(2):151-90. doi: 10.11646/zootaxa.3949.2.1.
4
IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies.IQ-TREE:一种用于估计最大似然系统发育树的快速且有效的随机算法。
Mol Biol Evol. 2015 Jan;32(1):268-74. doi: 10.1093/molbev/msu300. Epub 2014 Nov 3.
5
Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads--a baiting and iterative mapping approach.直接从基因组下一代测序读段重建线粒体基因组——一种诱饵和迭代映射方法。
Nucleic Acids Res. 2013 Jul;41(13):e129. doi: 10.1093/nar/gkt371. Epub 2013 May 9.
6
MITOS: improved de novo metazoan mitochondrial genome annotation.MITOS:改进的从头后生动物线粒体基因组注释。
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