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中国浙江省特有的珍稀濒危植物南方红豆杉(Taxaceae)完整质体基因组序列的特征分析。

Characterization of the complete plastome sequence of var. (Taxaceae), a rare and endangered plant species endemic to Zhejiang province, China.

作者信息

Jiang Ming, Wang Junfeng, Zhang Huijuan

机构信息

Zhejiang Provincial Key Laboratory of Plant Evolutionary and Conservation, College of Life Sciences, Taizhou University, Jiaojiang, China.

Lishui Institute of Forestry, Lishui, China.

出版信息

Mitochondrial DNA B Resour. 2020 Jan 24;5(1):834-836. doi: 10.1080/23802359.2020.1715895.

DOI:10.1080/23802359.2020.1715895
PMID:33366773
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7748455/
Abstract

var. (Taxaceae) is an evergreen tree endemic to Zhejiang province, China, and it is listed as a rare plant species with extremely small populations. In our present study, we assembled the chloroplast (CP) genome of var. using high-throughput sequencing data generated by an Illumina Hiseq X Ten platform. The results indicate that the complete CP genome is 136,705 bp in size with an overall guanine and cytosine content of 35.5%. The plastome has lost its quadripartite structure. In the CP genome, there are a total of 119 genes, including 82 protein-coding genes, 4 ribosomal RNA genes, and 33 transfer RNA genes. Phylogenetic analysis revealed that var. is a sister species to .

摘要

某某变种(红豆杉科)是中国浙江省特有的一种常绿乔木,被列为极小种群的珍稀植物物种。在我们目前的研究中,我们利用Illumina Hiseq X Ten平台产生的高通量测序数据组装了某某变种的叶绿体(CP)基因组。结果表明,完整的CP基因组大小为136,705 bp,鸟嘌呤和胞嘧啶的总体含量为35.5%。质体基因组已失去其四分体结构。在CP基因组中,共有119个基因,包括82个蛋白质编码基因、4个核糖体RNA基因和33个转运RNA基因。系统发育分析表明,某某变种是某某物种的姐妹种。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fadc/7748455/103f19c1d7ad/TMDN_A_1715895_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fadc/7748455/103f19c1d7ad/TMDN_A_1715895_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fadc/7748455/103f19c1d7ad/TMDN_A_1715895_F0001_C.jpg

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