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茄科(Solanaceae)某植物完整叶绿体基因组的特征分析

Characterization of the complete chloroplast genome of (Solanaceae).

作者信息

Yisilam Gulbar, Mamut Reyim, Li Jin, Li Pan, Fu Chengxin

机构信息

Xinjiang Key Laboratory of Special Species Conservation and Regulatory Biology, Key Laboratory of Plant Stress Biology in Arid Land, College of Life Science, Xinjiang Normal University, Urumqi, China.

Key Laboratory of Conservation Biology for Endangered Wildlife of the Ministry of Education, and Laboratory of Systematic & Evolutionary Botany and Biodiversity, College of Life Sciences, Zhejiang University, Hangzhou, China.

出版信息

Mitochondrial DNA B Resour. 2018 Mar 22;3(1):361-362. doi: 10.1080/23802359.2018.1450681.

Abstract

is a precious desert plant with high medicinal and ecological values. It contains rich anthocyanins, which are safe natural pigments and could be used for natural food colorants. In this study, the complete chloroplast (cp) genome of was assembled on the basis of next generation sequencing. The whole genome is 154,996 bp in length, including two single copy regions (LSC: 85,993 bp and SSC: 18,213 bp) and two inverted repeat regions (IR: 25,395 bp). The overall G + C content of the genome is 37.9%. The cp genome consists of 111 unique genes, including 30 tRNA genes, 4 rRNA genes and 77 protein-coding genes. Phylogenetic analysis indicates that is closely clustered with , , and .

摘要

是一种具有高药用和生态价值的珍贵沙漠植物。它含有丰富的花青素,这些花青素是安全的天然色素,可用于天然食品着色剂。在本研究中,基于二代测序组装了 的完整叶绿体(cp)基因组。全基因组长度为154,996 bp,包括两个单拷贝区域(LSC:85,993 bp和SSC:18,213 bp)和两个反向重复区域(IR:25,395 bp)。基因组的总体G + C含量为37.9%。cp基因组由111个独特基因组成,包括30个tRNA基因、4个rRNA基因和77个蛋白质编码基因。系统发育分析表明, 与 、 和 紧密聚类。

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