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费氏弧菌的操控。

Control of Competence in Vibrio fischeri.

机构信息

Loyola University Chicago, Maywood, Illinois, USA.

Wheaton College, Wheaton, Illinois, USA.

出版信息

Appl Environ Microbiol. 2021 Feb 26;87(6). doi: 10.1128/AEM.01962-20.

Abstract

species, including the squid symbiont , become competent to take up DNA under specific conditions. For example, becomes competent when grown in the presence of chitin oligosaccharides or upon overproduction of the competence regulatory factor TfoX. While little is known about the regulatory pathway(s) that controls competence, this microbe encodes homologs of factors that control competence in the well-studied To further develop as a genetically tractable organism, we evaluated the roles of some of these competence homologs. Using TfoX-overproducing cells, we found that competence depends upon LitR, the homolog of master quorum-sensing and competence regulator HapR, and upon homologs of putative pilus genes that in facilitate DNA uptake. Disruption of genes for negative regulators upstream of LitR, namely, the LuxO protein and the small RNA (sRNA) Qrr1, resulted in increased transformation frequencies. Unlike LitR-controlled light production, however, competence did not vary with cell density under overexpression conditions. Analogous to the case with , the requirement for LitR could be suppressed by loss of the Dns nuclease. We also found a role for the putative competence regulator CytR. Finally, we determined that transformation frequencies varied depending on the TfoX-encoding plasmid, and we developed a new dual and overexpression construct that substantially increased the transformation frequency of a less genetically tractable strain. By advancing the ease of genetic manipulation of , these findings will facilitate the rapid discovery of genes involved in physiologically relevant processes, such as biofilm formation and host colonization. The ability of bacteria to take up DNA (competence) and incorporate foreign DNA into their genomes (transformation) permits them to rapidly evolve and gain new traits and/or acquire antibiotic resistances. It also facilitates laboratory-based investigations into mechanisms of specific phenotypes, such as those involved in host colonization. has long been a model for symbiotic bacterium-host interactions as well as for other aspects of its physiology, such as bioluminescence and biofilm formation. Competence of can be readily induced upon overexpression of the competence factor TfoX. Relatively little is known about the competence pathway, although homologs of factors known to be important in competence exist. By probing the importance of putative competence factors that control transformation of , this work deepens our understanding of the competence process and advances our ability to genetically manipulate this important model organism.

摘要

该物种包括鱿鱼共生体,在特定条件下能够摄取 DNA。例如,当在几丁寡糖存在下或过度产生竞争调节因子 TfoX 时, 就会变得有竞争力。虽然控制 竞争的调控途径知之甚少,但这种微生物编码了控制在研究充分的 中竞争的因子的同源物。为了进一步将 发展为一种可遗传操作的生物体,我们评估了其中一些竞争同源物的作用。使用过度表达 TfoX 的细胞,我们发现竞争依赖于 LitR,即 主群体感应和竞争调节因子 HapR 的同源物,以及在 中促进 DNA 摄取的假定菌毛基因的同源物。LitR 上游的负调控基因,即 LuxO 蛋白和小 RNA (sRNA) Qrr1 的缺失导致转化频率增加。然而,与 LitR 控制的光产生不同,在 过度表达条件下,竞争不随细胞密度而变化。类似于 的情况,LitR 的需求可以通过 Dns 核酸酶的缺失来抑制。我们还发现了假定的竞争调节因子 CytR 的作用。最后,我们确定转化频率取决于 TfoX 编码质粒,并且我们开发了一种新的 和 双重过度表达构建体,该构建体大大提高了一种遗传上较难操作的菌株的转化频率。通过提高 遗传操作的便利性,这些发现将促进与生理相关过程(如生物膜形成和宿主定植)相关的基因的快速发现。细菌摄取 DNA(竞争)并将外源 DNA 整合到其基因组中(转化)的能力使它们能够快速进化并获得新的特征和/或获得抗生素抗性。它还促进了基于实验室的特定表型机制的研究,例如那些涉及宿主定植的机制。 长期以来一直是共生菌-宿主相互作用以及其他生理方面(如生物发光和生物膜形成)的模型。在过度表达竞争因子 TfoX 后, 可以很容易地被诱导具有竞争力。尽管存在已知在 竞争中重要的因子的同源物,但关于 竞争途径的了解相对较少。通过探测控制 转化的假定竞争因子的重要性,这项工作加深了我们对竞争过程的理解,并提高了我们对这种重要模型生物进行遗传操作的能力。

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