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利用现代统计学习方法开发和验证预测模型,以估计全因死亡率的 10 年风险:一项大型基于人群的队列研究和外部验证。

Development and validation of prediction model to estimate 10-year risk of all-cause mortality using modern statistical learning methods: a large population-based cohort study and external validation.

机构信息

Department of Behavioural Science and Health, Institute of Epidemiology and Health Care, University College London, London, UK.

Department of Biostatistics & Health Informatics, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London, UK.

出版信息

BMC Med Res Methodol. 2021 Jan 6;21(1):8. doi: 10.1186/s12874-020-01204-7.

Abstract

BACKGROUND

In increasingly ageing populations, there is an emergent need to develop a robust prediction model for estimating an individual absolute risk for all-cause mortality, so that relevant assessments and interventions can be targeted appropriately. The objective of the study was to derive, evaluate and validate (internally and externally) a risk prediction model allowing rapid estimations of an absolute risk of all-cause mortality in the following 10 years.

METHODS

For the model development, data came from English Longitudinal Study of Ageing study, which comprised 9154 population-representative individuals aged 50-75 years, 1240 (13.5%) of whom died during the 10-year follow-up. Internal validation was carried out using Harrell's optimism-correction procedure; external validation was carried out using Health and Retirement Study (HRS), which is a nationally representative longitudinal survey of adults aged ≥50 years residing in the United States. Cox proportional hazards model with regularisation by the least absolute shrinkage and selection operator, where optimisation parameters were chosen based on repeated cross-validation, was employed for variable selection and model fitting. Measures of calibration, discrimination, sensitivity and specificity were determined in the development and validation cohorts.

RESULTS

The model selected 13 prognostic factors of all-cause mortality encompassing information on demographic characteristics, health comorbidity, lifestyle and cognitive functioning. The internally validated model had good discriminatory ability (c-index=0.74), specificity (72.5%) and sensitivity (73.0%). Following external validation, the model's prediction accuracy remained within a clinically acceptable range (c-index=0.69, calibration slope β=0.80, specificity=71.5% and sensitivity=70.6%). The main limitation of our model is twofold: 1) it may not be applicable to nursing home and other institutional populations, and 2) it was developed and validated in the cohorts with predominately white ethnicity.

CONCLUSIONS

A new prediction model that quantifies absolute risk of all-cause mortality in the following 10-years in the general population has been developed and externally validated. It has good prediction accuracy and is based on variables that are available in a variety of care and research settings. This model can facilitate identification of high risk for all-cause mortality older adults for further assessment or interventions.

摘要

背景

在人口老龄化加剧的背景下,迫切需要开发一种稳健的预测模型来估算个体全因死亡率的绝对风险,以便能够进行有针对性的相关评估和干预。本研究旨在开发、评估和验证(内部和外部)一种风险预测模型,以便能够快速估算接下来 10 年内全因死亡率的绝对风险。

方法

在模型开发过程中,数据来自英国老龄化纵向研究,该研究包括 9154 名年龄在 50-75 岁的具有代表性的人群,其中 1240 人(13.5%)在 10 年随访期间死亡。内部验证采用 Harrell 的优化校正程序;外部验证采用健康与退休研究(HRS),这是一项针对居住在美国的≥50 岁成年人的全国代表性纵向调查。采用最小绝对收缩和选择算子正则化的 Cox 比例风险模型进行变量选择和模型拟合,优化参数是基于重复交叉验证选择的。在开发和验证队列中确定了校准、区分度、敏感性和特异性的度量标准。

结果

该模型选择了 13 个全因死亡率的预后因素,涵盖了人口统计学特征、健康合并症、生活方式和认知功能的信息。内部验证的模型具有良好的区分能力(c 指数=0.74)、特异性(72.5%)和敏感性(73.0%)。经过外部验证,模型的预测准确性仍在可接受的临床范围内(c 指数=0.69,校准斜率β=0.80,特异性=71.5%,敏感性=70.6%)。我们模型的主要局限性有两个方面:1)它可能不适用于疗养院和其他机构人群;2)它是在以白人为主的队列中开发和验证的。

结论

我们开发并外部验证了一种新的预测模型,用于估算一般人群接下来 10 年内全因死亡率的绝对风险。该模型具有良好的预测准确性,并且基于在各种护理和研究环境中都可获得的变量。该模型可以帮助识别高全因死亡率风险的老年人,以便进行进一步评估或干预。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/702f/7789636/2a2372d1c0bc/12874_2020_1204_Fig1_HTML.jpg

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