从人乳中分离出的短双歧杆菌INIA P734（CECT 8178）的基因组序列
Genome Sequence of Bifidobacterium breve INIA P734 (CECT 8178), a Strain Isolated from Human Breast Milk.
作者信息
Rodrigo-Torres Lidia, Rodríguez Eva, Peirotén Ángela, Langa Susana, Medina Margarita, Arahal David R, Aznar Rosa, Arqués Juan L
机构信息
Departamento de Microbiología y Ecología, Universitat de València, Burjassot, Spain.
Colección Española de Cultivos Tipo, Universitat de València, Paterna, Spain.
出版信息
Microbiol Resour Announc. 2021 Jan 7;10(1):e00871-20. doi: 10.1128/MRA.00871-20.
Abstract
The draft genome sequence of INIA P734, a strain shared by mother and child, is reported. It consists of 50 contigs, with 2,391,925 bp, 2,099 genes, and a G+C content of 58.8%. The genome analysis revealed the absence of antibiotic resistance and pathogenicity-related genes.
摘要
报道了母婴共有的INIA P734菌株的基因组序列草图。它由50个重叠群组成，有2391925个碱基对、2099个基因，G+C含量为58.8%。基因组分析显示不存在抗生素抗性和致病性相关基因。
相似文献
1
Genome Sequence of Bifidobacterium breve INIA P734 (CECT 8178), a Strain Isolated from Human Breast Milk.从人乳中分离出的短双歧杆菌INIA P734（CECT 8178）的基因组序列
Microbiol Resour Announc. 2021 Jan 7;10(1):e00871-20. doi: 10.1128/MRA.00871-20.
2
Human Bifidobacterium strains as adjunct cultures in Spanish sheep milk cheese.西班牙绵羊乳干酪中双歧杆菌菌株作为辅助培养物。
J Dairy Sci. 2020 Sep;103(9):7695-7706. doi: 10.3168/jds.2020-18203. Epub 2020 Jul 16.
3
Technological Properties of Bifidobacterial Strains Shared by Mother and Child.母子双歧杆菌菌株的技术特性。
Biomed Res Int. 2019 Jan 17;2019:9814623. doi: 10.1155/2019/9814623. eCollection 2019.
4
Complete genome sequence of Bifidobacterium breve CECT 7263, a strain isolated from human milk.短双歧杆菌 CECT7263 的全基因组序列，该菌株分离自人乳。
J Bacteriol. 2012 Jul;194(14):3762-3. doi: 10.1128/JB.00691-12.
5
Draft genome sequence of DSM 32583, isolated from human milk.从人乳中分离出的DSM 32583的基因组序列草图。
Microbiol Resour Announc. 2023 Nov 16;12(11):e0041223. doi: 10.1128/MRA.00412-23. Epub 2023 Oct 10.
6
Draft Genome Sequence of Bifidobacterium longum ZJ1, Isolated from a Centenarian in Anhui, China.从中国安徽一位百岁老人体内分离出的长双歧杆菌ZJ1的基因组序列草图
Microbiol Resour Announc. 2019 Aug 15;8(33):e00878-19. doi: 10.1128/MRA.00878-19.
7
Anaerobic green fluorescent protein as a marker of Bifidobacterium strains.厌氧绿色荧光蛋白作为双歧杆菌菌株的标记物。
Int J Food Microbiol. 2014 Apr 3;175:6-13. doi: 10.1016/j.ijfoodmicro.2014.01.008. Epub 2014 Jan 16.
8
Analysis of infant isolates of Bifidobacterium breve by comparative genome hybridization indicates the existence of new subspecies with marked infant specificity.比较基因组杂交分析婴儿短双歧杆菌分离株表明存在具有明显婴儿特异性的新亚种。
Res Microbiol. 2011 Sep;162(7):664-70. doi: 10.1016/j.resmic.2011.06.008. Epub 2011 Jun 21.
9
A Gene Homologous to rRNA Methylase Genes Confers Erythromycin and Clindamycin Resistance in Bifidobacterium breve.短双歧杆菌中与 rRNA 甲基化酶基因同源的基因赋予红霉素和克林霉素耐药性。
Appl Environ Microbiol. 2018 May 1;84(10). doi: 10.1128/AEM.02888-17. Print 2018 May 15.
10
Bifidobacterium bifidum ATCC 15696 and Bifidobacterium breve 24b Metabolic Interaction Based on 2'--Fucosyl-Lactose Studied in Steady-State Cultures in a Freter-Style Chemostat.双歧双歧杆菌 ATCC 15696 和短双歧杆菌 24b 基于 2'-岩藻糖基乳糖的稳态培养物中的代谢相互作用在弗雷特式恒化器中研究。
Appl Environ Microbiol. 2019 Mar 22;85(7). doi: 10.1128/AEM.02783-18. Print 2019 Apr 1.
引用本文的文献
1
Genomic Characterization and Safety Assessment of BS2-PB3 as Functional Food.BS2-PB3 的基因组特征分析及其作为功能性食品的安全性评估。
J Microbiol Biotechnol. 2024 Apr 28;34(4):871-879. doi: 10.4014/jmb.2311.11031. Epub 2024 Jan 25.
2
Fermented soy beverages as vehicle of probiotic lactobacilli strains and source of bioactive isoflavones: A potential double functional effect.发酵大豆饮品作为益生菌乳酸菌菌株的载体和生物活性异黄酮的来源：一种潜在的双重功能效应。
Heliyon. 2023 Apr 3;9(4):e14991. doi: 10.1016/j.heliyon.2023.e14991. eCollection 2023 Apr.
本文引用的文献
1
Guidance on the characterisation of microorganisms used as feed additives or as production organisms.用作饲料添加剂或生产生物的微生物特性鉴定指南。
EFSA J. 2018 Mar 28;16(3):e05206. doi: 10.2903/j.efsa.2018.5206. eCollection 2018 Mar.
2
Technological Properties of Bifidobacterial Strains Shared by Mother and Child.母子双歧杆菌菌株的技术特性。
Biomed Res Int. 2019 Jan 17;2019:9814623. doi: 10.1155/2019/9814623. eCollection 2019.
3
Unveiling Genomic Diversity among Members of the Species , a Widely Distributed Gut Commensal of the Animal Kingdom.揭示动物王国中广泛分布的肠道共生物种成员之间的基因组多样性。
Appl Environ Microbiol. 2019 Apr 4;85(8). doi: 10.1128/AEM.03065-18. Print 2019 Apr 15.
4
Bifidobacterial strains shared by mother and child as source of probiotics.母子共享双歧杆菌菌株作为益生菌的来源。
Benef Microbes. 2018 Feb 27;9(2):231-238. doi: 10.3920/BM2017.0133.
5
CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database.CARD 2017：全面抗生素抗性数据库的扩展及以模型为中心的管理
Nucleic Acids Res. 2017 Jan 4;45(D1):D566-D573. doi: 10.1093/nar/gkw1004. Epub 2016 Oct 26.
6
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes.CheckM：评估从分离株、单细胞和宏基因组中获得的微生物基因组质量。
Genome Res. 2015 Jul;25(7):1043-55. doi: 10.1101/gr.186072.114. Epub 2015 May 14.
7
Prokka: rapid prokaryotic genome annotation.Prokka：快速的原核生物基因组注释。
Bioinformatics. 2014 Jul 15;30(14):2068-9. doi: 10.1093/bioinformatics/btu153. Epub 2014 Mar 18.
8
Lactobacilli and bifidobacteria in human breast milk: influence of antibiotherapy and other host and clinical factors.人乳中的乳酸杆菌和双歧杆菌：抗生素治疗及其他宿主和临床因素的影响
J Pediatr Gastroenterol Nutr. 2014 Jul;59(1):78-88. doi: 10.1097/MPG.0000000000000347.
9
The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST).SEED 与利用子系统技术进行快速微生物基因组注释（RAST）。
Nucleic Acids Res. 2014 Jan;42(Database issue):D206-14. doi: 10.1093/nar/gkt1226. Epub 2013 Nov 29.
10
PathogenFinder--distinguishing friend from foe using bacterial whole genome sequence data.PathogenFinder--利用细菌全基因组序列数据区分敌友。
PLoS One. 2013 Oct 28;8(10):e77302. doi: 10.1371/journal.pone.0077302. eCollection 2013.
Zotero 插件