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整合素 Mac-1(αβ)的αI 结构域与细胞因子多效蛋白相互作用的结构特征。

Structural Characterization of the Interaction between the αI-Domain of the Integrin Mac-1 (αβ) and the Cytokine Pleiotrophin.

出版信息

Biochemistry. 2021 Jan 26;60(3):182-193. doi: 10.1021/acs.biochem.0c00700. Epub 2021 Jan 11.

Abstract

Integrin Mac-1 (αβ) is an adhesion receptor vital to many functions of myeloid leukocytes. It is also the most promiscuous member of the integrin family capable of recognizing a broad range of ligands. In particular, its ligand-binding αI-domain is known to bind cationic proteins/peptides depleted in acidic residues. This contradicts the canonical ligand-binding mechanism of αI-domains, which requires an acidic amino acid in the ligand to coordinate the divalent cation within the metal ion-dependent adhesion site (MIDAS) of αI-domains. The lack of acidic amino acids in the αI-domain-binding sequences suggests the existence of an as-yet uncharacterized interaction mechanism. In the present study, we analyzed interactions of the αI-domain with a representative Mac-1 ligand, the cationic cytokine pleiotrophin (PTN). Through NMR chemical shift perturbation analysis, cross saturation, NOESY, and mutagenesis studies, we found the interaction between the αI-domain and PTN is divalent cation-independent and mediated mostly by hydrophobic contacts between the N-terminal domain of PTN and residues in the α5-β5 loop of αI-domain. The observation that increased ionic strength weakens the interaction between the proteins indicates electrostatic forces may also play a significant role in the binding. On the basis of the results from these experiments, we formulated a model of the interaction between the αI-domain and PTN.

摘要

整合素 Mac-1(αβ)是一种黏附受体,对髓样白细胞的许多功能至关重要。它也是整合素家族中最混杂的成员,能够识别广泛的配体。特别是,其配体结合的αI 结构域已知与酸性残基耗尽的阳离子蛋白/肽结合。这与αI 结构域的经典配体结合机制相矛盾,后者要求配体中的酸性氨基酸与αI 结构域中的金属离子依赖性黏附位点(MIDAS)内的二价阳离子配位。αI 结构域结合序列中缺乏酸性氨基酸表明存在尚未表征的相互作用机制。在本研究中,我们分析了αI 结构域与代表性 Mac-1 配体阳离子细胞因子多效蛋白(PTN)之间的相互作用。通过 NMR 化学位移扰动分析、交叉饱和、NOESY 和突变研究,我们发现αI 结构域与 PTN 的相互作用不依赖于二价阳离子,主要由 PTN 的 N 端结构域与αI 结构域的α5-β5 环中的残基之间的疏水接触介导。观察到增加离子强度会削弱蛋白质之间的相互作用表明静电相互作用也可能在结合中发挥重要作用。基于这些实验的结果,我们提出了αI 结构域与 PTN 相互作用的模型。

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