Chu Qing, Zheng Weiwei, Su Hui, Zhang Lei, Chang Renjie, Gao Wenya, Xu Tianjun
Laboratory of Fish Molecular Immunology, College of Fisheries and Life Science, Shanghai Ocean University, Shanghai, China.
Laboratory of Marine Biology and Biotechnology, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China.
J Virol. 2021 Mar 10;95(7). doi: 10.1128/JVI.02145-20. Epub 2021 Jan 13.
Circular RNAs (circRNAs) represent a class of widespread, diverse, and covalently closed circRNAs that function as microRNA (miRNA) sponges and crucial regulators of gene expression in mammals. However, the regulation and function of circRNAs in lower vertebrates are still unknown. Here, we first discover a highly conserved circRNA termed circRasGEF1B, which displays a high conservation from mammals to fish and serves as key regulator in eliciting antiviral immunity in teleost fish. Results indicate that circRasGEF1B was highly expressed in -infected tissues and cells. Functionally, miR-21-3p could inhibit cellular antiviral responses significantly, whereas circRasGEF1B counteract the effects of miR-21-3p. In mechanism, the results demonstrate that circRasGEF1B acts as a competing endogenous RNA (ceRNA) of miR-21-3p to relieve the repressive effect of miR-21-3p on its target MITA, then enhance the innate antiviral responses. Our results not only provide a novel insight into the functions of circRNAs in lower vertebrates, but broaden our understanding of circRNAs in viral infection. (SCRV) is a typical fish RNA rhabdovirus, which is one of the most significant viral pathogens in teleost fish and can cause severe hemorrhagic septicemia in freshwater and marine fishes. Here, we discovered a highly conserved circRNAs called circRasGEF1B, which acts as a key regulator for innate antiviral responses upon SCRV infection. circRasGEF1B acts as an endogenous sponge of miR-21-3p that downregulates miR-21-3p expression levels. circRasGEF1B is able to bind to miR-21-3p directly and regulates MITA expression. To our knowledge, this report is the first to characterize circRNA-miRNA regulatory networks that exist in lower vertebrates.
环状RNA(circRNAs)是一类广泛存在、多样且共价闭合的环状RNA,在哺乳动物中作为微小RNA(miRNA)海绵和基因表达的关键调节因子发挥作用。然而,circRNAs在低等脊椎动物中的调控和功能仍不清楚。在此,我们首次发现了一种高度保守的环状RNA,称为circRasGEF1B,它从哺乳动物到鱼类都表现出高度保守性,并在硬骨鱼引发抗病毒免疫中作为关键调节因子。结果表明,circRasGEF1B在感染的组织和细胞中高表达。在功能上,miR-21-3p可显著抑制细胞抗病毒反应,而circRasGEF1B可抵消miR-21-3p的作用。在机制上,结果表明circRasGEF1B作为miR-21-3p的竞争性内源RNA(ceRNA),以减轻miR-21-3p对其靶标MITA的抑制作用,进而增强先天抗病毒反应。我们的结果不仅为低等脊椎动物中circRNAs的功能提供了新的见解,还拓宽了我们对circRNAs在病毒感染中的理解。传染性脾肾坏死病毒(SCRV)是一种典型的鱼类RNA弹状病毒,是硬骨鱼中最重要的病毒病原体之一,可在淡水和海水鱼类中引起严重的出血性败血症。在此,我们发现了一种高度保守的环状RNA,称为circRasGEF1B,它在SCRV感染后作为先天抗病毒反应的关键调节因子发挥作用。circRasGEF1B作为miR-21-3p的内源海绵,下调miR-21-3p的表达水平。circRasGEF1B能够直接结合miR-21-3p并调节MITA的表达。据我们所知,本报告首次对低等脊椎动物中存在的circRNA-miRNA调控网络进行了表征。