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CRISPR/Cas9 基因编辑缺陷型人胃癌类器官模型揭示致癌转化的必要和非必要模式。

A CRISPR/Cas9-Engineered -Deficient Human Gastric Cancer Organoid Model Reveals Essential and Nonessential Modes of Oncogenic Transformation.

机构信息

Department of Medicine, Division of Hematology, Stanford University School of Medicine, Stanford, California.

Department of Pathology, Stanford University School of Medicine, Stanford, California.

出版信息

Cancer Discov. 2021 Jun;11(6):1562-1581. doi: 10.1158/2159-8290.CD-20-1109. Epub 2021 Jan 15.


DOI:10.1158/2159-8290.CD-20-1109
PMID:33451982
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8346515/
Abstract

Mutations in rank among the most common molecular aberrations in human cancer. However, oncogenic consequences of mutation in human cells remain poorly defined due to lack of forward genetic models. Here, CRISPR/Cas9-mediated knockout (KO) in primary human gastric organoids induced morphologic dysplasia, tumorigenicity, and mucinous differentiation. Genetic WNT/β-catenin activation rescued mucinous differentiation, but not hyperproliferation, suggesting alternative pathways of KO-mediated transformation. mutation induced transcriptional regulatory modules characteristic of microsatellite instability and Epstein-Barr virus-associated subtype human gastric cancer, including -associated mitotic genes and survivin. Convergently, high-throughput compound screening indicated selective vulnerability of -deficient organoids to inhibition of BIRC5/survivin, functionally implicating this pathway as an essential mediator of KO-dependent early-stage gastric tumorigenesis. Overall, we define distinct pathways downstream of oncogenic mutation, with nonessential WNT-inhibited mucinous differentiation in parallel with essential transcriptional -stimulated proliferation, illustrating the general utility of organoid-based forward genetic cancer analysis in human cells. SIGNIFICANCE: We establish the first human forward genetic modeling of a commonly mutated tumor suppressor gene, . Our study integrates diverse modalities including CRISPR/Cas9 genome editing, organoid culture, systems biology, and small-molecule screening to derive novel insights into early transformation mechanisms of -deficient gastric cancers...

摘要

在人类癌症中,RANK 基因突变是最常见的分子异常之一。然而,由于缺乏正向遗传模型,人类细胞中 RANK 基因突变的致癌后果仍未得到明确界定。在这里,通过 CRISPR/Cas9 介导的原发性人胃类器官中的 RANK 基因敲除(KO)诱导了形态发育不良、致瘤性和黏液分化。遗传 WNT/β-连环蛋白激活挽救了黏液分化,但不能挽救过度增殖,这表明 RANK 基因 KO 介导的转化存在替代途径。RANK 基因突变诱导了微卫星不稳定和 Epstein-Barr 病毒相关的人类胃癌亚型的转录调控模块,包括与 RANK 相关的有丝分裂基因和存活素。同样,高通量化合物筛选表明 BIRC5/survivin 抑制对 RANK 缺陷型类器官具有选择性易感性,这表明该途径是 RANK 基因 KO 依赖性早期胃肿瘤发生的重要介质。总体而言,我们定义了致癌 RANK 基因突变的下游不同途径,具有非必需的 WNT 抑制性黏液分化与必需的转录刺激增殖平行,说明了基于类器官的人类细胞正向遗传癌症分析的普遍适用性。意义:我们建立了第一个常见突变肿瘤抑制基因 RANK 的人类正向遗传模型。我们的研究整合了多种模式,包括 CRISPR/Cas9 基因组编辑、类器官培养、系统生物学和小分子筛选,为 RANK 基因缺陷型胃癌的早期转化机制提供了新的见解。

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Br J Cancer. 2025-8-26

[2]
Molecular interplay of ARID1A in gastrointestinal cancers.

Med Oncol. 2025-8-23

[3]
Large-scale CRISPR screening in primary human 3D gastric organoids enables comprehensive dissection of gene-drug interactions.

Nat Commun. 2025-8-14

[4]
Cancer patient-derived organoids: Novel models for the study of natural products.

Int J Biol Sci. 2025-7-11

[5]
ARID1A mutation drives gastric tumorigenesis via activating type 2 immune dominant microenvironment.

iScience. 2025-7-15

[6]
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Acta Pharm Sin B. 2025-7

[7]
Endocrine cancer organoids in basic and translational medical research.

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[8]
Organoids technology in cancer research: from basic applications to advanced models.

Front Cell Dev Biol. 2025-5-22

[9]
Investigating the antimicrobial and anticancer potential of culturable fungal endophytes isolated from the stems of Kirkia acuminata Oliv.

BMC Microbiol. 2025-5-30

[10]
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Trends Cancer. 2025-8

本文引用的文献

[1]
Applications of Organoids for Cancer Biology and Precision Medicine.

Nat Cancer. 2020-8

[2]
CRISPR screens in cancer spheroids identify 3D growth-specific vulnerabilities.

Nature. 2020-3-11

[3]
Modeling Breast Cancer Using CRISPR-Cas9-Mediated Engineering of Human Breast Organoids.

J Natl Cancer Inst. 2020-5-1

[4]
ARID1A and PI3-kinase pathway mutations in the endometrium drive epithelial transdifferentiation and collective invasion.

Nat Commun. 2019-8-7

[5]
Probing the Tumor Suppressor Function of BAP1 in CRISPR-Engineered Human Liver Organoids.

Cell Stem Cell. 2019-5-23

[6]
Survivin at a glance.

J Cell Sci. 2019-4-4

[7]
Chromatin remodeling mediated by ARID1A is indispensable for normal hematopoiesis in mice.

Leukemia. 2019-3-11

[8]
Targeting the Vulnerability of Glutathione Metabolism in ARID1A-Deficient Cancers.

Cancer Cell. 2019-1-24

[9]
HTiP: High-Throughput Immunomodulator Phenotypic Screening Platform to Reveal IAP Antagonists as Anti-cancer Immune Enhancers.

Cell Chem Biol. 2019-1-10

[10]
Arid1a is essential for intestinal stem cells through Sox9 regulation.

Proc Natl Acad Sci U S A. 2019-1-11

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