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.的完整叶绿体基因组序列

The complete chloroplast genome sequence of .

作者信息

Hou Zhe

机构信息

Key Laboratory of Southwest China Wildlife Resources Conservation (Ministry of Education), China West Normal University, Sichuan, Nanchong, China.

State Key Laboratory of Tree Genetics and Breeding, Chinese Academy of Forestry, Beijing, China.

出版信息

Mitochondrial DNA B Resour. 2020 May 14;5(3):2095-2096. doi: 10.1080/23802359.2020.1765216.

DOI:10.1080/23802359.2020.1765216
PMID:33457756
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7783037/
Abstract

The complete chloroplast genome sequence of was characterized from Illumina pair-end sequencing. The chloroplast genome of was 161,056 bp in length, containing a large single-copy region (LSC) of 90,416 bp, a small single-copy region (SSC) of 18,538 bp, and two inverted repeat (IR) regions of 26,051 bp. The overall GC content is 36.20%, while the correponding values of the LSC, SSC, and IR regions are 64.5%, 69.4%, and 60.2%, respectively. The genome contains 129 complete genes, including8 rRNAs, 37 tRNAs and 84 protein coding genes. A phylogenetic analysis showed that and form the basis of the produced evolutionary tree. and , which belongto the group , share the closest relationship. The analysis of the cp genome of provides crucial genetic information for further studies of this precious species and the taxonomy, phylogenetics and evolution of .

摘要

通过Illumina双端测序对[物种名称]的完整叶绿体基因组序列进行了表征。[物种名称]的叶绿体基因组长度为161,056 bp,包含一个90,416 bp的大单拷贝区域(LSC)、一个18,538 bp的小单拷贝区域(SSC)和两个26,051 bp的反向重复(IR)区域。总体GC含量为36.20%,而LSC、SSC和IR区域的相应值分别为64.5%、69.4%和60.2%。该基因组包含129个完整基因,包括8个rRNA、37个tRNA和84个蛋白质编码基因。系统发育分析表明,[物种名称1]和[物种名称2]构成了所产生进化树的基础。属于[某组名称]的[物种名称3]和[物种名称4]关系最为密切。对[物种名称]叶绿体基因组的分析为进一步研究这个珍贵物种以及[物种名称]的分类学、系统发育学和进化提供了关键的遗传信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/67de/7783037/d52766d9e46b/TMDN_A_1765216_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/67de/7783037/d52766d9e46b/TMDN_A_1765216_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/67de/7783037/d52766d9e46b/TMDN_A_1765216_F0001_B.jpg

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