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直翅目蜚蠊科美洲大蠊的完整线粒体基因组及其在蜚蠊科内的系统发育关系。

The Complete Mitogenome of the Wood-Feeding Cockroach Cryptocercus meridianus (Blattodea: Cryptocercidae) and Its Phylogenetic Relationship among Cockroach Families.

机构信息

College of Plant Protection, Southwest University, Beibei, Chongqing 400716, China.

出版信息

Int J Mol Sci. 2017 Nov 12;18(11):2397. doi: 10.3390/ijms18112397.

Abstract

In this study, the complete mitochondrial genome of was sequenced. The circular mitochondrial genome is 15,322 bp in size and contains 13 protein-coding genes, two ribosomal RNA genes (12S rRNA and 16S rRNA), 22 transfer RNA genes, and one D-loop region. We compare the mitogenome of with that of and . The base composition of the whole genome was 45.20%, 9.74%, 16.06%, and 29.00% for A, G, C, and T, respectively; it shows a high AT content (74.2%), similar to the mitogenomes of and . The protein-coding genes are initiated with typical mitochondrial start codons except for with TTG. The gene order of the mitogenome differs from the typical insect pattern for the translocation of , while the mitogenomes of the other two species, and , are consistent with the typical insect pattern. There are two very long non-coding intergenic regions lying on both sides of the rearranged gene . The phylogenetic relationships were constructed based on the nucleotide sequence of 13 protein-coding genes and two ribosomal RNA genes. The mitogenome of is the first representative of the order Blattodea that demonstrates rearrangement, and it will contribute to the further study of the phylogeny and evolution of the genus and related taxa.

摘要

在这项研究中,我们对 的完整线粒体基因组进行了测序。该线粒体基因组为环状,大小为 15322bp,包含 13 个蛋白质编码基因、两个核糖体 RNA 基因(12S rRNA 和 16S rRNA)、22 个转移 RNA 基因和一个 D 环区。我们将 的线粒体基因组与 和 的进行了比较。整个基因组的碱基组成分别为 A、G、C 和 T 的 45.20%、9.74%、16.06%和 29.00%;表现出高 AT 含量(74.2%),与 和 的线粒体基因组相似。蛋白质编码基因以典型的线粒体起始密码子开始,除了 以 TTG 开始。 的线粒体基因组的基因排列与典型的昆虫模式不同,即 基因的移位,而其他两种 物种, 和 ,的线粒体基因组与典型的昆虫模式一致。有两个非常长的非编码基因间隔区位于重排基因 的两侧。基于 13 个蛋白质编码基因和两个核糖体 RNA 基因的核苷酸序列构建了系统发育关系。 的线粒体基因组是展示重排的第一个直翅目代表,它将有助于进一步研究 属和相关分类群的系统发育和进化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7a63/5713365/06c96ce7cde3/ijms-18-02397-g001.jpg

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