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(竹亚科)的完整叶绿体基因组序列

Complete chloroplast genome sequence of (Bambuseae).

作者信息

Zheng Ying, Hou Dan, Zhuo Juan, Zheng Renhong, Wang Yong, Li Benxiang, Yu Xuejun, Lin Xinchun

机构信息

State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou, Zhejiang, P. R. China.

Yibin Forestry and Bamboo Industry Research Institute, Yibin, Sichuan, P. R. China.

出版信息

Mitochondrial DNA B Resour. 2020 Jul 23;5(3):2972-2973. doi: 10.1080/23802359.2020.1793699.

Abstract

is a tropical woody bamboo widely distributed in Sichuan and southeastern of China with important economic and ecological values. We performed a complete chloroplast (cp) genome of . using Illumina NovaSeq PE150 platform. The length of complete cp sequence is 139,500 bp in size with a pair of inverted repeat (IR) regions of 43,587 bp, which separates a large single-copy (LSC) region of 83,036 bp and a small single-copy (SSC) region of 12,875 bp. Plastid genome contains 132 genes, including 84 protein-coding genes, 40 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on 30 cp genomes indicates that is closely related to in Bambuseae.

摘要

是一种热带木本竹子,广泛分布于中国四川和东南部,具有重要的经济和生态价值。我们使用Illumina NovaSeq PE150平台对其进行了完整的叶绿体(cp)基因组测序。完整的cp序列长度为139,500 bp,有一对43,587 bp的反向重复(IR)区域,将83,036 bp的大单拷贝(LSC)区域和12,875 bp的小单拷贝(SSC)区域分开。质体基因组包含132个基因,包括84个蛋白质编码基因、40个tRNA基因和8个rRNA基因。基于30个cp基因组的系统发育分析表明,它与竹亚科中的 密切相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1421/7781895/7e96a4870808/TMDN_A_1793699_F0001_C.jpg

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