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胡蜂(膜翅目:胡蜂科)的完整线粒体DNA序列

Complete mitochondrial DNA sequence of the paper wasp (Hymenoptera: Vespidae).

作者信息

Yamasaki Kazuhisa, Sayama Katsuhiko, Oishi Tomoki, Nakahama Kanae, Yoshioka Masato, Okuyama Hisashi, Takahashi Jun-Ichi

机构信息

Faculty of Applied Biological Sciences, Gifu University, Gifu, Japan.

Institute for Sustainable Agro-ecosystem Services, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Nishitokyo, Japan.

出版信息

Mitochondrial DNA B Resour. 2020 Aug 25;5(3):3195-3196. doi: 10.1080/23802359.2020.1810155.

Abstract

The paper wasp is distributed in cold regions of northern East Asia to Russia. are characterized by having longer cells than those of the closely related , which has a similar life history, as an adaptation to cold regions. The phylogenetic relationships of paper wasps have recently been studied; however, the genetic diversity and population structure of has not been determined. The present study is the first to analyze the complete mitochondrial genome using next generation sequencing of collected from Sapporo, Hokkaido Prefecture, Japan. The genome consisted of a closed loop that was 16,383 bp-long and included 13 protein coding genes (PCGs), 22 tRNA genes, two rRNA genes, and one AT-rich control region. The average AT content was 84.54%. The heavy (H)-strand was predicted to have 12 PCGs and 14 tRNA genes, while the light (L)-strand was predicted to contain one PCGs, eight tRNA genes, and two rRNA genes. All PCGs started with ATG. Stop codons were of two types: TAA for 11 genes ( and ) and TAG for two genes ( and ). The molecular phylogenetic relationship based on the maximum likelihood method using 13 PCGs was consistent with some previous studies in which a closely relationship between and .

摘要

胡蜂分布于东亚北部至俄罗斯的寒冷地区。其特点是细胞比亲缘关系密切、生活史相似的[相关物种]更长,这是对寒冷地区的一种适应。最近对胡蜂的系统发育关系进行了研究;然而,[该物种]的遗传多样性和种群结构尚未确定。本研究首次使用下一代测序技术对从日本北海道札幌采集的[该物种]进行完整线粒体基因组分析。该基因组由一个16383bp长的闭环组成,包括13个蛋白质编码基因(PCGs)、22个tRNA基因、2个rRNA基因和一个富含AT的控制区。平均AT含量为84.54%。重链(H)预计有12个PCGs和14个tRNA基因,而轻链(L)预计包含1个PCGs、8个tRNA基因和2个rRNA基因。所有PCGs均以ATG起始。终止密码子有两种类型:11个基因([具体基因1]和[具体基因2])为TAA,2个基因([具体基因3]和[具体基因4])为TAG。基于13个PCGs使用最大似然法的分子系统发育关系与之前一些研究一致,即[该物种]与[相关物种]之间关系密切。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/789e/7781888/c9c362240e6b/TMDN_A_1810155_F0001_B.jpg

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