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蒲桃(桃金娘科)的完整叶绿体基因组序列

Complete chloroplast genome sequence of the rose apple, (Myrtaceae).

作者信息

Sun Zhixia, Huang Qingping, Feng Chen

机构信息

Fujian Provincial Key Laboratory of the Development and Utilization of Bamboo Resources, Sanming University, Sanming, China.

Key Laboratory of Plant Resources Conservation and Sustainable Utilization, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, China.

出版信息

Mitochondrial DNA B Resour. 2020 Oct 5;5(3):3460-3462. doi: 10.1080/23802359.2020.1826000.

DOI:10.1080/23802359.2020.1826000
PMID:33458204
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7782344/
Abstract

Plants in the genus have been widely used as traditional medicine, fruit crops, and ornamental trees. In this study, we reported the complete chloroplast genome of (L.) Alston which was known as rose apple. The chloroplast genome of this species is 158541 bp in length, including a pair of inverted repeat regions (IRs) (26076 bp) that is divided by a large single copy area (LSC) (88036 bp) and a small single copy area (SSC) (18353 bp). The circular chloroplast genome of contains 132 unique genes, composing of 85 protein-coding genes, 39 tRNA genes and 8 rRNA genes. Phylogenetic analysis indicates that is clustered with species in genus . This complete chloroplast genome of will provide a powerful tool to accelerate breeding, biotechnological and phylogenetic study.

摘要

该属植物已被广泛用作传统药物、水果作物和观赏树木。在本研究中,我们报道了被称为蒲桃的(L.)阿尔斯顿的完整叶绿体基因组。该物种的叶绿体基因组长度为158541bp,包括一对反向重复区域(IRs)(26076bp),其被一个大单拷贝区域(LSC)(88036bp)和一个小单拷贝区域(SSC)(18353bp)分开。蒲桃的环状叶绿体基因组包含132个独特基因,由85个蛋白质编码基因、39个tRNA基因和8个rRNA基因组成。系统发育分析表明,蒲桃与该属中的物种聚类在一起。蒲桃的这个完整叶绿体基因组将为加速育种、生物技术和系统发育研究提供一个强大的工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24c4/7782344/55f00d04ef19/TMDN_A_1826000_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24c4/7782344/55f00d04ef19/TMDN_A_1826000_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24c4/7782344/55f00d04ef19/TMDN_A_1826000_F0001_B.jpg

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本文引用的文献

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Chloroplast genome of tropical and sub-tropical fruit tree (Myrtaceae).热带和亚热带果树(桃金娘科)的叶绿体基因组。
Mitochondrial DNA B Resour. 2018 Aug 13;3(2):890-891. doi: 10.1080/23802359.2018.1501296.
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PGA:一个用于叶绿体基因组快速、准确且灵活批量注释的软件包。
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Interpreting the modern distribution of Myrtaceae using a dated molecular phylogeny.运用分子系统发育时标解读桃金娘科的现代分布格局。
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Chemical profile and in vivo hypoglycemic effects of Syzygium jambos, Costus speciosus and Tapeinochilos ananassae plant extracts used as diabetes adjuvants in Puerto Rico.在波多黎各用作糖尿病辅助剂的蒲桃、闭鞘姜和艳山姜植物提取物的化学特征及体内降血糖作用
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