Faculty of Chemistry, Bashkir State University, 450076 Ufa, Russia.
Molecules. 2021 Jan 14;26(2):421. doi: 10.3390/molecules26020421.
Using the GUSAR 2013 program, the quantitative structure-antioxidant activity relationship has been studied for 74 phenols, aminophenols, aromatic amines and uracils having lgk = 0.01-6.65 (where k is the rate constant for the reaction of antioxidants with peroxyl radicals generated upon oxidation). Based on the atomic descriptors (Quantitative Neighborhood of Atoms (QNA) and Multilevel Neighborhoods of Atoms (MNA)) and molecular (topological length, topological volume and lipophilicity) descriptors, we have developed 9 statistically significant QSAR consensus models that demonstrate high accuracy in predicting the lgk values for the compounds of training sets and appropriately predict lgk for the test samples. Moderate predictive power of these models is demonstrated using metrics of two categories: (1) based on the determination coefficients R (R, R, Q(), Q(), RmTSi2¯) and based on the concordance correlation coefficient (CCC)); or (2) based on the prediction lgk errors (root mean square error (RMSEP), mean absolute error (MAE) and standard deviation (S.D.)) The RBF-SCR method has been used for selecting the descriptors. Our theoretical prognosis of the lgk for 8-PPDA, a known antioxidant, based on the consensus models well agrees with the experimental value measure in the present work. Thus, the algorithms for calculating the descriptors implemented in the GUSAR 2013 program allow simulating kinetic parameters of the reactions underling the liquid-phase oxidation of hydrocarbons.
利用 GUSAR 2013 程序,对 74 种具有 lgk=0.01-6.65(其中 k 为抗氧化剂与氧化产生的过氧自由基反应的速率常数)的酚类、氨基酚、芳香胺和尿嘧啶进行了定量结构-抗氧化活性关系的研究。基于原子描述符(定量原子邻域(QNA)和多级原子邻域(MNA))和分子描述符(拓扑长度、拓扑体积和疏水性),我们开发了 9 个统计学上显著的 QSAR 共识模型,这些模型在预测训练集化合物的 lgk 值方面具有很高的准确性,并适当地预测了测试样本的 lgk 值。这些模型的中等预测能力通过两种类别指标来证明:(1)基于确定系数 R(R、R、Q()、Q()、RmTSi2¯)和基于一致性相关系数(CCC));或(2)基于预测 lgk 误差(均方根误差(RMSEP)、平均绝对误差(MAE)和标准偏差(S.D.))。RBF-SCR 方法用于选择描述符。我们基于共识模型对已知抗氧化剂 8-PPDA 的 lgk 的理论预测与本工作中的实验值测量非常吻合。因此,GUSAR 2013 程序中实现的描述符计算算法允许模拟烃类液相氧化反应动力学参数。