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温带木质藤本植物(G.Forst.)梅斯恩(蓼科)的注释质体基因组。

Annotated plastome of the temperate woody vine (G.Forst.) Meisn. (Polygonaceae).

作者信息

Schuster Tanja M, Gibbs Moreland D, Bayly Michael J

机构信息

National Herbarium of Victoria, Royal Botanic Gardens Victoria, South Yarra, Australia.

School of BioSciences, The University of Melbourne, Parkville, Australia.

出版信息

Mitochondrial DNA B Resour. 2018 Mar 27;3(1):399-400. doi: 10.1080/23802359.2018.1456979.

Abstract

We assembled the plastome of the temperate, Southern Hemisphere liana from high throughput sequencing data (paired-end Illumina reads) generated from total genomic DNA sequencing libraries. . ' chloroplast genome sequence (GenBank: MG604297) is 163,484 bp in length and composed of long single copy (LSC; 88,166 bp) and short single copy (SSC; 13,486 bp) regions flanked by inverted repeats (IR; 30,916 bp each) typical for angiosperms. The plastome includes 131 genes comprising 83 protein-coding genes, 37 transfer RNA genes, eight ribosomal RNA genes, two possible pseudogenes, and with internal stop codons, and truncated repeats of and at IR boundaries.

摘要

我们从总基因组DNA测序文库生成的高通量测序数据(双端Illumina读数)中组装了南半球温带藤本植物的质体基因组。叶绿体基因组序列(GenBank:MG604297)长度为163,484 bp,由被子植物典型的长单拷贝(LSC;88,166 bp)和短单拷贝(SSC;13,486 bp)区域组成,两侧为反向重复序列(IR;各30,916 bp)。质体基因组包含131个基因,包括83个蛋白质编码基因、37个转运RNA基因、8个核糖体RNA基因、两个可能的假基因,以及内部终止密码子,并且在IR边界处有 和 的截短重复序列。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d59/7800917/67b4bbe6ad4b/TMDN_A_1456979_F0001_B.jpg

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