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菜豆(Phaseolus vulgaris L.)叶绿体全基因组的特征分析

Characterisation of the complete chloroplast genome of the common bean, L.

作者信息

Meng Xianxin, Li Ming

机构信息

College of Agriculture, Northeast Agricultural University, Harbin, People's Republic of China.

Crop Breeding Institute, Heilongjiang Academy of Agricultural Sciences, Harbin, People's Republic of China.

出版信息

Mitochondrial DNA B Resour. 2018 Aug 20;3(2):918-920. doi: 10.1080/23802359.2018.1502634.

Abstract

Common bean ( L.) is the most important grain legume in the human diet and has a role in sustainable agriculture. In this study, we obtained the complete chloroplast genome sequence of common bean using BGISEQ-500 sequencing. Its chloroplast genome size has 155,622 bp, containing a large single copy region (84,924 bp), a small single copy region (18,570 bp) and a pair of IR regions (26,064 bp). The overall GC contents of the chloroplast genome were 37.9%. This circular genome contains 131 annotated genes, including 85 protein-coding genes, 37 tRNAs, and 8 rRNAs. The phylogenetic analysis using maximum likelihood (ML) method showed that Common bean has the closest relationship with This complete chloroplast genomes can be subsequently used for the genetic breeding and agricultural development of this valuable species.

摘要

菜豆(Phaseolus vulgaris L.)是人类饮食中最重要的食用豆类,在可持续农业中发挥着作用。在本研究中,我们使用BGISEQ-500测序获得了菜豆的完整叶绿体基因组序列。其叶绿体基因组大小为155,622 bp,包含一个大单拷贝区域(84,924 bp)、一个小单拷贝区域(18,570 bp)和一对反向重复区域(26,064 bp)。叶绿体基因组的总体GC含量为37.9%。这个环状基因组包含131个注释基因,包括85个蛋白质编码基因、37个tRNA和8个rRNA。使用最大似然(ML)方法进行的系统发育分析表明,菜豆与 关系最为密切。这个完整的叶绿体基因组随后可用于该珍贵物种的遗传育种和农业发展。 (原文中“showed that Common bean has the closest relationship with ”这里表述不完整,翻译时保留原文状态)

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/814c/7800106/75161c63a479/TMDN_A_1502634_F0001_C.jpg

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