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(鳀科,鲱形目)的完整线粒体基因组及鲱形目的系统发育研究

The complete mitochondrial genome of (Engraulinae, Engranlidae, Clupeoidei) and phylogenetic studies of Clupeoidei.

作者信息

Jiang Hui, Lü Zhenming, Liu Liqing, Liu Bingjian, Gong Li

机构信息

National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, College of Marine Science and Technology, Zhejiang Ocean University, Zhoushan, People's Republic of China.

出版信息

Mitochondrial DNA B Resour. 2018 Jan 10;3(1):110-111. doi: 10.1080/23802359.2018.1424584.

Abstract

The complete mitochondrial genome of has been determined. The whole sequence was 16,894 bp in length and included 13 protein-coding genes, 22 transfer RNA genes, two ribosomal RNA genes and one control region (D-loop). The overall base composition is A 30.77%, C 27.97%, G 16.25%, T 25.01%, with a slightly A + T bias of 55.78%. With the exception of and eight tRNA genes, all other mitochondrial genes are encoded on the heavy strand. Three tandem repeat sequences were observed in the control region. Phylogenetic tree was constructed based on 13 protein-coding genes sequences of 21 clupeoidei species, and the result showed that is most closely related to These mitogenome sequence data will be useful for population genetics and phylogenetic analysis of the Clupeoidei.

摘要

已确定了[物种名称]的完整线粒体基因组。整个序列长度为16,894 bp,包括13个蛋白质编码基因、22个转运RNA基因、两个核糖体RNA基因和一个控制区(D环)。总体碱基组成为A 30.77%、C 27.97%、G 16.25%、T 25.01%,A+T略有偏向,为55.78%。除了[某些基因或区域]和八个tRNA基因外,所有其他线粒体基因都在重链上编码。在控制区观察到三个串联重复序列。基于21种鲱形目物种的13个蛋白质编码基因序列构建了系统发育树,结果表明[物种名称]与[相关物种名称]关系最为密切。这些线粒体基因组序列数据将有助于鲱形目的群体遗传学和系统发育分析。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1382/7800704/01839834e4de/TMDN_A_1424584_F0001_B.jpg

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