担子菌纲食用菌的完整线粒体基因组
The complete mitochondrial genome of the Basidiomycete edible fungus .
作者信息
Wu Ying-Ying, Shang Jun-Jun, Li Yan, Zhou Chen-Li, Hou Di, Li Jia-Li, Tan Qi, Bao Da-Peng, Yang Rui-Heng
机构信息
National Engineering Research Center of Edible Fungi, Ministry of Science and Technology (MOST), Key Laboratory of Edible Fungi Resources and Utilization (South), Ministry of Agriculture, Institute of Edible Fungi, Shanghai Academy of Agricultural Sciences, Shanghai, China.
出版信息
Mitochondrial DNA B Resour. 2018 Oct 30;3(2):1241-1243. doi: 10.1080/23802359.2018.1532343.
The complete mitochondrial genome of the edible fungus was published in this paper. It was determined using Pacbio and Illumina sequencing. The complete mitochondrial DNA (mtDNA) is 106,417 bp in length with a GC content of 31.74%, which was the fourth large mitogenome in Agaricales. The circular mitogenome encoded 67 protein-coding genes and one ribosomal RNAs (rns). Among these genes, 13 conserved protein-coding genes were determined in the genome, including 6 subunits of NAD dehydrogenase (nad1-4, 4L and 6), three cytochrome oxidases (cox1-3), one apocytochrome b (cob) and three ATP synthases (atp6, apt 8 and apt 9). The phylogenic analysis confirmed that (Lyophyllaceae) clustered together with (Tricholomataceae).
本文发表了该食用菌的完整线粒体基因组。它是通过Pacbio和Illumina测序确定的。完整的线粒体DNA（mtDNA）长度为106,417 bp，GC含量为31.74%，是伞菌目中第四大的线粒体基因组。环状线粒体基因组编码67个蛋白质编码基因和一个核糖体RNA（rns）。在这些基因中，基因组中确定了13个保守的蛋白质编码基因，包括NAD脱氢酶的6个亚基（nad1-4、4L和6）、三个细胞色素氧化酶（cox1-3）、一个脱辅基细胞色素b（cob）和三个ATP合酶（atp6、apt 8和apt 9）。系统发育分析证实，（裂褶菌科）与（口蘑科）聚集在一起。
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