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新种沉积物等翅菌,从奇利卡湖分离得到。

Isoptericola sediminis sp. nov., Isolated from Chilika Lagoon.

作者信息

Kumar Dhanesh, U Jagadeeshwari, A Krishnaiah, G Suresh, Sasikala Ch, Ramana Ch Venkata

机构信息

University of Hyderabad School of Life Sciences, Hyderabad, Telangana, India.

Bacterial Discovery Laboratory, Centre for Environment, Institute of Science and Technology, J. N. T. University Hyderabad, Kukatpally, Hyderabad, 500085, India.

出版信息

Curr Microbiol. 2021 Feb;78(2):848-855. doi: 10.1007/s00284-020-02325-4. Epub 2021 Jan 21.

Abstract

A yellow-colored, Gram-stain-positive, rod shaped, non-motile bacterium, designated as strain JC619, was isolated from the sediment of Chilika lagoon, India. Strain JC619 shows highest 16S rRNA gene sequence similarity (99.08%) with Isoptericola chiayiensis KCTC 19740 followed by Isoptericola halotolerans KCTC 19046 (98.6%) and other members of the genus Isoptericola (< 98%). NaCl is required for growth of strain JC619 and tolerates up to 18% (w/v) and pH up to 10. Strain JC619 grows optimally at temperature 30 °C, NaCl concentration of 3% (w/v), and at pH 7.5. The genome size of strain JC619 is 3.2 Mb with G+C content of 73.0 mol%. ANI scores of strain JC619 are 81.9% and 80.1% and dDDH values are 24.4% and 22.7% with I. chiayiensis KCTC 19740 and I. halotolerans KCTC 19046, respectively. Respiratory quinones are MK-9(H4) and MK-9(H2). Predominant fatty acids (> 10%) are anteiso-C, iso-C, and iso-C. Major polar lipids of strain JC619 are phosphatidylglycerol, phosphatidylinositolmannoside, diphosphatidylglycerol, and phosphatidylinositol. Strain JC619 is catalase positive but cytochrome oxidase negative and reduces nitrate. The genomic distinction of strain JC619 with its nearest related species of the genus Isoptericola is well supported with chemotaxonomic characteristics and differential physiological properties. Therefore, strain JC619 represents a new species under the genus Isoptericola for which Isoptericola sediminis sp. nov. is proposed. Type strain is JC619 (=KCTC 49244 =NBRC 114063).

摘要

从印度奇利卡泻湖的沉积物中分离出一株黄色、革兰氏染色阳性、杆状、无运动性的细菌,命名为JC619菌株。JC619菌株与嘉义等翅菌KCTC 19740的16S rRNA基因序列相似性最高(99.08%),其次是耐盐等翅菌KCTC 19046(98.6%)以及等翅菌属的其他成员(<98%)。JC619菌株的生长需要NaCl,可耐受高达18%(w/v)的NaCl浓度和pH值为10的环境。JC619菌株在30℃、NaCl浓度为3%(w/v)、pH值为7.5的条件下生长最佳。JC619菌株的基因组大小为3.2 Mb,G+C含量为73.0 mol%。JC619菌株与嘉义等翅菌KCTC 19740以及耐盐等翅菌KCTC 19046的ANI得分分别为81.9%和80.1%,dDDH值分别为24.4%和22.7%。呼吸醌为MK-9(H4)和MK-9(H2)。主要脂肪酸(>10%)为anteiso-C、iso-C和iso-C。JC619菌株的主要极性脂类为磷脂酰甘油、磷脂酰肌醇甘露糖苷、二磷脂酰甘油和磷脂酰肌醇。JC619菌株过氧化氢酶阳性,但细胞色素氧化酶阴性,能还原硝酸盐。化学分类特征和不同的生理特性充分支持了JC619菌株与其最接近的等翅菌属相关物种的基因组差异。因此,JC619菌株代表了等翅菌属中的一个新物种,为此提出了新种沉积物等翅菌。模式菌株为JC619(=KCTC 49244 =NBRC 114063)。

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