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新种拉克沙湖嗜盐杆菌,从印度奇利卡湖分离得到。

Arenibacter lacus sp. nov., Isolated from Chilika Lagoon, India.

作者信息

Kumar Dhanesh, Smita Nandardhane, Kumar Gaurav, Suresh Gandham, Jagadeeshwari Uppada, Sasikala Chintalapati, Ramana Chintalapati Venkata

机构信息

Department of Plant Sciences, School of Life Sciences, University of Hyderabad, P.O. Central University, Hyderabad, 500046, India.

Bacterial Discovery Laboratory, Centre for Environment, Institute of Science and Technology, J. N. T. University Hyderabad, Kukatpally, Hyderabad, 500085, India.

出版信息

Curr Microbiol. 2020 Dec;77(12):4152-4159. doi: 10.1007/s00284-020-02205-x. Epub 2020 Sep 21.

Abstract

A shiny dark yellow pigmented, Gram-stain-negative, rod-shaped, non-motile bacterium, designated as strain JC631, was isolated from the sediment ecosystem of Chilika lagoon, India. Strain JC631 tolerates up to pH 10 and NaCl up to 3% (w/v). MK6 is the only respiratory quinone. Predominant (> 10%) cellular fatty acids are anteiso-C, anteiso-C, and anteiso-C. Major polar lipids are phosphatidylethanolamine, phosphatidylcholine, a few unidentified phospholipids, and a few unidentified aminolipids. 16S rRNA gene sequencing showed that strain JC631 shared the highest sequence identity (98.7%) with Arenibacter latericius KMM 426 followed by Arenibacter certesii CCUG 48006 (98.6%) and other members of the genus Arenibacter (< 97%). The genome size of strain JC631 is 4.16 Mb with a GC content of 40.8 mol%. Strain JC631 has ANI scores of 78.3% and 78.1%; dDDH values of 22.2% and 21.8%, respectively, with the type strains of A. latericius and A. certesii. The genomic distinction is well supported by chemotaxonomic characteristics and differential physiological properties. This supports strain JC631 to be described as a new species of the genus Arenibacter, named as Arenibacter lacus sp. nov. The type strain is JC631 (= KCTC 72002 = NBRC 114071).

摘要

从印度奇利卡泻湖的沉积物生态系统中分离出一种有光泽的深黄色色素沉着、革兰氏染色阴性、杆状、不运动的细菌,命名为JC631菌株。JC631菌株能耐受高达pH 10和3%(w/v)的氯化钠。MK6是唯一的呼吸醌。主要(>10%)细胞脂肪酸为anteiso-C、anteiso-C和anteiso-C。主要极性脂质是磷脂酰乙醇胺、磷脂酰胆碱、一些未鉴定的磷脂和一些未鉴定的氨基脂质。16S rRNA基因测序表明,JC631菌株与迟滞沙雷氏菌KMM 426的序列同一性最高(98.7%),其次是塞氏沙雷氏菌CCUG 48006(98.6%)和沙雷氏菌属的其他成员(<97%)。JC631菌株的基因组大小为4.16 Mb,GC含量为40.8 mol%。JC631菌株与迟滞沙雷氏菌和塞氏沙雷氏菌的模式菌株的ANI得分分别为78.3%和78.1%;dDDH值分别为22.2%和21.8%。化学分类特征和不同的生理特性很好地支持了基因组差异。这支持将JC631菌株描述为沙雷氏菌属的一个新物种,命名为湖泊沙雷氏菌(Arenibacter lacus sp. nov.)。模式菌株为JC631(=KCTC 72002=NBRC 114071)。

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