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一种新型羧酸酯酶来源于堆肥宏基因组,对高盐度具有高稳定性和高活性。

A Novel Carboxylesterase Derived from a Compost Metagenome Exhibiting High Stability and Activity towards High Salinity.

机构信息

Department of Genomic and Applied Microbiology and Göttingen Genomics Laboratory, Institute of Microbiology and Genetics, Georg-August-University of Göttingen, Grisebachstr. 8, 37077 Göttingen, Germany.

出版信息

Genes (Basel). 2021 Jan 19;12(1):122. doi: 10.3390/genes12010122.

Abstract

Halotolerant lipolytic enzymes have gained growing interest, due to potential applications under harsh conditions, such as hypersalinity and presence of organic solvents. In this study, a lipolytic gene, , encoding 287 amino acids was identified by functional screening of a compost metagenome. Subsequently, the gene was heterologously expressed, and the recombinant protein (Est56) was purified and characterized. Est56 is a mesophilic (T 50 °C) and moderate alkaliphilic (pH 8) enzyme, showing high thermostability at 30 and 40 °C. Strikingly, Est56 is halotolerant as it exhibited high activity and stability in the presence of up to 4 M NaCl or KCl. Est56 also displayed enhanced stability against high temperatures (50 and 60 °C) and urea (2, 4, and 6 M) in the presence of NaCl. In addition, the recently reported halotolerant lipolytic enzymes were summarized. Phylogenetic analysis grouped these enzymes into 13 lipolytic protein families. The majority (45%) including Est56 belonged to family IV. To explore the haloadaptation of halotolerant enzymes, the amino acid composition between halotolerant and halophilic enzymes was statistically compared. The most distinctive feature of halophilic from non-halophilic enzymes are the higher content of acidic residues (Asp and Glu), and a lower content of lysine, aliphatic hydrophobic (Leu, Met and Ile) and polar (Asn) residues. The amino acid composition and 3-D structure analysis suggested that the high content of acidic residues (Asp and Glu, 12.2%) and low content of lysine residues (0.7%), as well as the excess of surface-exposed acidic residues might be responsible for the haloadaptation of Est56.

摘要

耐盐脂肪酶由于其在恶劣条件下(如高盐度和有机溶剂存在)的潜在应用而受到越来越多的关注。在这项研究中,通过对堆肥宏基因组的功能筛选,鉴定出了一个编码 287 个氨基酸的脂肪酶基因 。随后,该基因被异源表达,纯化并鉴定了重组蛋白(Est56)。Est56 是一种嗜温(T 50°C)和中度嗜碱(pH8)的酶,在 30°C 和 40°C 时表现出很高的热稳定性。值得注意的是,Est56 具有耐盐性,因为它在高达 4 M NaCl 或 KCl 的存在下表现出高活性和稳定性。Est56 在存在 NaCl 的情况下,还表现出对高温(50°C 和 60°C)和尿素(2、4 和 6 M)的增强稳定性。此外,还总结了最近报道的耐盐脂肪酶。系统发育分析将这些酶分为 13 个脂肪酶蛋白家族。包括 Est56 在内的大多数酶(45%)属于家族 IV。为了探索耐盐酶的耐盐性适应,对耐盐酶和嗜盐酶的氨基酸组成进行了统计比较。嗜盐酶与非嗜盐酶的最显著区别特征是酸性残基(天冬氨酸和谷氨酸)含量较高,赖氨酸、疏水性脂肪族(亮氨酸、蛋氨酸和异亮氨酸)和极性(天冬酰胺)残基含量较低。氨基酸组成和 3-D 结构分析表明,高含量的酸性残基(天冬氨酸和谷氨酸,12.2%)和低含量的赖氨酸残基(0.7%),以及过量的表面暴露酸性残基可能是 Est56 耐盐性的原因。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f056/7835964/84c8d286edea/genes-12-00122-g001.jpg

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