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通过比较转录组分析解析菜豆对单独和联合干旱及热胁迫的分子响应。

Dissecting the molecular responses of lentil to individual and combined drought and heat stresses by comparative transcriptomic analysis.

机构信息

Department of Agronomy and Plant Breeding, Faculty of Agriculture, Lorestan University, Khorramabad, Iran.

Department of Biology, School of Sciences, Razi University, Kermanshah, Iran.

出版信息

Genomics. 2021 Mar;113(2):693-705. doi: 10.1016/j.ygeno.2020.12.038. Epub 2021 Jan 21.

Abstract

Lentil cultivation could be challenged by combined heat and drought stress in semi-arid regions. We used RNA-seq approach to profile transcriptome changes of Lens culinaris exposed to individual and combined heat and drought stresses. It was determined that most of the differentially expressed genes observed in response to combined stress, could not be identified by analysis of transcriptome exposed to corresponding individual stresses. Interestingly, this study results revealed that the expression of ribosome generation and protein biosynthesis and starch degradation pathways related genes were uniquely up-regulated under the combined stress. Although multiple genes related to antioxidant activity were up-regulated in response to all stresses, variation in types and expression levels of these genes under the combined stress were higher than that of individual stresses. Using this comparative approach, for the first time, we reported up-regulation of several TF, CDPK, CYP, and antioxidant genes in response to combined stress in plants.

摘要

在半干旱地区,扁豆种植可能会受到高温和干旱的双重压力的挑战。我们采用 RNA-seq 方法对暴露于单独和联合高温和干旱胁迫下的菜豆进行转录组变化分析。结果表明,大多数在联合胁迫下观察到的差异表达基因,无法通过分析单独对应胁迫的转录组来识别。有趣的是,本研究结果表明,核糖体生成和蛋白质生物合成以及淀粉降解途径相关基因的表达在联合胁迫下被特异性地上调。虽然与抗氧化活性相关的多个基因在所有胁迫下都被上调,但在联合胁迫下,这些基因的类型和表达水平的变化高于单独胁迫。通过这种比较方法,我们首次报道了在植物中,几种 TF、CDPK、CYP 和抗氧化基因在联合胁迫下的上调表达。

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