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中国濒危特有物种**（松科）**的叶绿体全基因组特征分析

Characterization of the complete chloroplast genome of (Pinaceae), an endangered and endemic species in China.

作者信息

Yang Mei-Qing, Du Yan, Ling Li-Zhen

机构信息

School of Pharmacy, Baotou Medical College, Baotou, China.

School of Biological Sciences and Technology, Liupanshui Normal University, Liupanshui, China.

出版信息

Mitochondrial DNA B Resour. 2018 Oct 29;3(2):1195-1197. doi: 10.1080/23802359.2018.1519381.

DOI:10.1080/23802359.2018.1519381
PMID:33490571
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7800402/
Abstract

The complete cp genome of was 117,014 bp in size, containing a large single copy (LSC, 64,061 bp) region and a small single copy (SSC, 52,007 bp) region separated by two reduced inverted repeats (IRs, 473 bp). A total of 107 genes were predicted, including 73 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Most of the 51 simple sequence repeats (SSRs) were mononucleotides motifs of A/T types and were found to be located in non-coding regions. Phylogenetic analysis of Asian showed clustered a strongly-supported clade with , , and .

摘要

[物种名称]的完整叶绿体基因组大小为117,014碱基对，包含一个大单拷贝（LSC，64,061碱基对）区域和一个小单拷贝（SSC，52,007碱基对）区域，这两个区域被两个反向重复序列（IRs，473碱基对）隔开。共预测到107个基因，包括73个蛋白质编码基因、30个tRNA基因和4个rRNA基因。51个简单序列重复（SSRs）中的大多数是A/T类型的单核苷酸基序，且发现它们位于非编码区。对亚洲[物种名称]的系统发育分析表明，[物种名称]与[其他物种名称1]、[其他物种名称2]、[其他物种名称3]和[其他物种名称4]聚集在一个支持度很高的分支中。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/517d/7800402/a0a19e323aad/TMDN_A_1519381_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/517d/7800402/a0a19e323aad/TMDN_A_1519381_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/517d/7800402/a0a19e323aad/TMDN_A_1519381_F0001_B.jpg

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Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Jul;27(4):2635-6. doi: 10.3109/19401736.2015.1041130. Epub 2015 May 29.
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