Heir Even, Moen Birgitte, Åsli Anette Wold, Sunde Marianne, Langsrud Solveig
Nofima, Norwegian Institute of Food, Fisheries and Aquaculture Research, P. O. Box 210, N-1431 Ås, Norway.
Department of Animal Health and Food Safety, Section of Food Safety and Emerging Health Threats, Norwegian Veterinary Institute, P.O. Box 750 Sentrum, N-0106 Oslo, Norway.
Microorganisms. 2021 Jan 20;9(2):207. doi: 10.3390/microorganisms9020207.
is ubiquitous in nature and a predominant genus in many foods and food processing environments, where it primarily represents major food spoilage organisms. The food chain has also been reported to be a potential reservoir of antibiotic-resistant . The purpose of the current study was to determine the occurrence of antibiotic resistance in psychrotrophic spp. collected over a time span of 26 years from retail chicken in Norway and characterize their genetic diversity, phylogenetic distribution and resistance genes through whole-genome sequence analyses. Among the 325 confirmed spp. isolates by 16S rRNA gene sequencing, antibiotic susceptibility profiles of 175 isolates to 12 antibiotics were determined. A subset of 31 isolates being resistant to ≥3 antibiotics were whole-genome sequenced. The isolates were dominated by species of the lineage. Isolates susceptible to all antibiotics or resistant to ≥3 antibiotics comprised 20.6% and 24.1%, respectively. The most common resistance was to aztreonam (72.6%), colistin (30.2%), imipenem (25.6%) and meropenem (12.6%). Resistance properties appeared relatively stable over the 26-year study period but with taxa-specific differences. Whole-genome sequencing showed high genome variability, where isolates resistant to ≥3 antibiotics belonged to seven species. A single metallo-betalactmase gene () was detected, though intrinsic resistance determinants dominated, including resistance-nodulation (RND), ATP-binding cassette (ABC) and small multidrug resistance (Smr) efflux pumps. This study provides further knowledge on the distribution of psychrotrophic spp. in chicken meat and their antibiotic resistance properties. Further monitoring should be encouraged to determine food as a source of antibiotic resistance and maintain the overall favorable situation with regard to antibiotic resistance in the Norwegian food chain.
在自然界中普遍存在,是许多食品和食品加工环境中的优势属,在这些环境中它主要代表主要的食品腐败微生物。据报道,食物链也是抗生素抗性的潜在储存库。本研究的目的是确定从挪威零售鸡肉中在26年时间跨度内收集的嗜冷菌属物种中的抗生素抗性发生情况,并通过全基因组序列分析来表征它们的遗传多样性、系统发育分布和抗性基因。通过16S rRNA基因测序确认的325株嗜冷菌属分离株中,测定了175株分离株对12种抗生素的药敏谱。对31株对≥3种抗生素耐药的分离株进行了全基因组测序。分离株以嗜冷菌属谱系的物种为主。对所有抗生素敏感或对≥3种抗生素耐药的分离株分别占20.6%和24.1%。最常见的耐药性是对氨曲南(72.6%)、黏菌素(30.2%)、亚胺培南(25.6%)和美罗培南(12.6%)。在26年的研究期间,抗性特性似乎相对稳定,但存在分类群特异性差异。全基因组测序显示基因组变异性高,其中对≥3种抗生素耐药的分离株属于7个物种。检测到一个单一的金属β-内酰胺酶基因(),尽管固有抗性决定因素占主导,包括抗性-结瘤(RND)、ATP结合盒(ABC)和小多药耐药(Smr)外排泵。本研究提供了关于嗜冷菌属物种在鸡肉中的分布及其抗生素抗性特性的进一步知识。应鼓励进一步监测,以确定食品作为抗生素抗性的来源,并维持挪威食物链中抗生素抗性方面的总体有利形势。