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- 处理的肠道和大脑中的 和 的 DNA 甲基化谱。

DNA Methylation Profiles of and in Gut and Brain of -Treated .

机构信息

Department of Molecular Medicine and Medical Biotechnology, University of Naples "Federico II", Via S. Pansini 5, 80131 Naples, Italy.

CEINGE Biotecnologie Avanzate, via Gaetano Salvatore 482, 80145 Naples, Italy.

出版信息

Biomolecules. 2021 Jan 22;11(2):142. doi: 10.3390/biom11020142.

Abstract

The bidirectional microbiota-gut-brain axis has raised increasing interest over the past years in the context of health and disease, but there is a lack of information on molecular mechanisms underlying this connection. We hypothesized that change in microbiota composition may affect brain epigenetics leading to long-lasting effects on specific brain gene regulation. To test this hypothesis, we used (Danio Rerio) as a model system. As previously shown, treatment with high doses of probiotics can modulate behavior in , causing significant changes in the expression of some brain-relevant genes, such as and . Using an ultra-deep targeted analysis, we investigated the methylation state of the and promoter region in the brain and gut of probiotic-treated and untreated Thanks to the high resolution power of our analysis, we evaluated cell-to-cell methylation differences. At this resolution level, we found slight DNA methylation changes in probiotic-treated samples, likely related to a subgroup of brain and gut cells, and that specific DNA methylation signatures significantly correlated with specific behavioral scores.

摘要

双向微生物群-肠-脑轴在健康和疾病背景下引起了越来越多的关注,但对于这种联系的分子机制缺乏信息。我们假设微生物群落组成的变化可能会影响大脑表观遗传学,从而对特定的大脑基因调控产生持久的影响。为了验证这一假设,我们使用斑马鱼作为模型系统。如前所述,高剂量益生菌处理可以调节斑马鱼的行为,导致一些与大脑相关的基因表达发生显著变化,如 和 。我们使用超深度靶向分析,研究了益生菌处理和未处理斑马鱼大脑和肠道中 和 启动子区域的甲基化状态。由于我们分析的高分辨率能力,我们评估了细胞间的甲基化差异。在这个分辨率水平上,我们发现益生菌处理样本中的 DNA 甲基化变化很小,可能与大脑和肠道细胞的一个亚群有关,并且特定的 DNA 甲基化特征与特定的行为评分显著相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b9b1/7911505/ef2c57652c59/biomolecules-11-00142-g001.jpg

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