Tang Kai, Yang Li-Hua, Chen Yu-Ping, Tao Yu, Feng Fu-Ying, Meng Jian-Yu
Institute of Grassland Research, Chinese Academy of Agricultural Sciences, Key Laboratory of Grassland Ecology and Restoration, Ministry of Agriculture, Hohhot 010010, PR China.
Institute for Applied and Environmental Microbiology, College of Life Science, Inner Mongolia Agricultural University, Hohhot 010018, PR China.
Int J Syst Evol Microbiol. 2019 Jun;71(3). doi: 10.1099/ijsem.0.004677. Epub 2021 Feb 2.
A pink-pigmented, Gram-stain-negative, rod-shaped, strictly aerobic bacterial strain MIMtkB3, was isolated from moss crusts in Hunshandake desert of China. Cells grew at 15-45 °C (optimum of 28 °C), at pH of 6.0-8.5 (optimum of 7.0) and with 0-1.0 % (w/v) NaCl (optimum of 0 %). The strain could biosynthesize the green-coloured pigment bacteriochlorophyll (BChl ). The respiratory quinone was ubiquinone Q-10, while C ω7c and C 2OH were the major fatty acids. Phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, an unidentified aminophospholipid, one unidentified phospholipid, three unidentified glycolipid and one unidentified lipid were the major polar lipids. Strain MIMtkB3 was most closely related to NAU-10, CC-LY736, and SW of the family with 16S rRNA gene similarities of 93.09, 92.02 and 91.73%, respectively. The genomic DNA G+C content calculated on complete genome sequencing was 69.3 mol%. The average nucleotide identity between strain MIMtkB3 and its closely related type strains in was below 77.96 % and digital DNA-DNA hybridization lower than 24.70 %. Full light utilization pathway of aerobic anoxygenic phototrophic bacteria was identified in the genome. Based on phenotypic, chemotaxonomic and phylogenetic characteristics, strain MIMtkB3 represents a novel genus of the family , for which the name gen. nov., sp. nov. is proposed. The type strain is MIMtkB3 (=KCTC 42633=MCCC 1K00570).
从中国浑善达克沙地的苔藓结皮中分离出一株粉红色色素、革兰氏染色阴性、杆状、严格需氧的细菌菌株MIMtkB3。该菌株在15 - 45 °C(最适温度28 °C)、pH值6.0 - 8.5(最适pH值7.0)和0 - 1.0 %(w/v)NaCl(最适盐浓度0 %)的条件下生长。该菌株能够生物合成绿色色素细菌叶绿素(BChl)。呼吸醌为泛醌Q - 10,而C ω7c和C 2OH是主要脂肪酸。磷脂酰乙醇胺、磷脂酰甘油、二磷脂酰甘油、一种未鉴定的氨基磷脂、一种未鉴定的磷脂、三种未鉴定的糖脂和一种未鉴定的脂类是主要极性脂类。菌株MIMtkB3与红螺菌科的NAU - 10、CC - LY736和SW关系最为密切,其16S rRNA基因相似性分别为93.09%、92.02%和91.73%。基于全基因组测序计算的基因组DNA G + C含量为69.3 mol%。菌株MIMtkB3与其在红螺菌科中密切相关的模式菌株之间的平均核苷酸同一性低于77.96 %,数字DNA - DNA杂交低于24.70 %。在基因组中鉴定出了好氧不产氧光合细菌的全光利用途径。基于表型、化学分类和系统发育特征,菌株MIMtkB3代表红螺菌科的一个新属,为此提出新属名 gen. nov.,新种名 sp. nov.。模式菌株为MIMtkB3(=KCTC 42633 = MCCC 1K00570)。