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通过合理设计将人神经球蛋白转化为多功能过氧化物酶。

Conversion of Human Neuroglobin into a Multifunctional Peroxidase by Rational Design.

机构信息

School of Chemistry and Chemical Engineering, University of South China, Hengyang 421001, China.

Key Lab of Sustainable Development of Polar Fisheries, Ministry of Agriculture and Rural Affairs, Lab for Marine Drugs and Byproducts of Pilot National Lab for Marine Science and Technology, Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao 266071, China.

出版信息

Inorg Chem. 2021 Feb 15;60(4):2839-2845. doi: 10.1021/acs.inorgchem.0c03777. Epub 2021 Feb 4.

Abstract

Protein design has received much attention in the last decades. With an additional disulfide bond to enhance the protein stability, human A15C neuroglobin (Ngb) is an ideal protein scaffold for heme enzyme design. In this study, we rationally converted A15C Ngb into a multifunctional peroxidase by replacing the heme axial His64 with an Asp residue, where Asp64 and the native Lys67 at the heme distal site were proposed to act as an acid-base catalytic couple for HO activation. Kinetic studies showed that the catalytic efficiency of A15C/H64D Ngb was much higher (∼50-80-fold) than that of native dehaloperoxidase, which even exceeds (∼3-fold) that of the most efficient native horseradish peroxidase. Moreover, the dye-decolorizing peroxidase activity was also comparable to that of some native enzymes. Electron paramagnetic resonance, molecular docking, and isothermal titration calorimetry studies provided valuable information for the substrate-protein interactions. Therefore, this study presents the rational design of an efficient multifunctional peroxidase based on Ngb with potential applications such as in bioremediation for environmental sustainability.

摘要

在过去的几十年中,蛋白质设计受到了广泛关注。通过添加一个二硫键来增强蛋白质稳定性,人 A15C 神经红蛋白(Ngb)是血红素酶设计的理想蛋白质支架。在这项研究中,我们通过将血红素轴向 His64 替换为 Asp 残基,将 A15C Ngb 合理地转化为多功能过氧化物酶,其中 Asp64 和血红素远端的天然 Lys67 被提议作为 HO 激活的酸碱催化对。动力学研究表明,A15C/H64D Ngb 的催化效率比天然脱卤过氧化物酶高得多(∼50-80 倍),甚至超过(∼3 倍)最有效的天然辣根过氧化物酶。此外,染料脱色过氧化物酶活性也与一些天然酶相当。电子顺磁共振、分子对接和等温滴定量热法研究为底物-蛋白质相互作用提供了有价值的信息。因此,本研究基于 Ngb 设计了一种高效的多功能过氧化物酶,具有环境可持续性的生物修复等潜在应用。

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