National Centre for Polar and Ocean Research, Ministry of Earth Sciences (Government of India), Headland Sada, Vasco-da-Gama, Goa, 403 804, India.
CUSAT-NCPOR Centre for Polar Sciences, Cochin University of Science and Technology (CUSAT), Kochi, 682 016, India.
World J Microbiol Biotechnol. 2021 Feb 5;37(3):41. doi: 10.1007/s11274-020-02993-1.
Diazotrophy in the Arctic environment is poorly understood compared to tropical and subtropical regions. Hence in this study, we report the abundance and diversity of diazotrophs in Arctic fjord sediments and elucidate the role of environmental factors on the distribution of diazotrophs. The study was conducted during the boreal summer in the Kongsfjorden, an Arctic fjord situated in the western coast of Spitsbergen. The abundance of nifH gene was measured through quantitative real-time PCR and the diversity of diazotrophs was assessed by nifH targeted clone library and next generation sequence analysis. Results revealed that the abundance of nifH gene in the surface sediments ranged from 2.3 × 10 to 3.7 × 10 copies g. The δ-proteobacterial diazotrophs (71% of total sequence) were the dominant class observed in this study. Major genera retrieved from the sequence analysis were Desulfovibrionaceae (25% of total sequence), Desulfuromonadaceae (18% of total sequence) and Desulfobacteriaceae (10% of total sequence); these are important diazotrophic iron and sulfur-reducing bacterial clade in the Kongsfjorden sediments. The abundance of nifH gene showed a significant positive correlation TOC/TN ratio (r = 0.96, p ≤ 0.05) and total organic carbon (p ≤ 0.05) content in the fjord sediments. The higher TOC/TN ratio (4.24-14.5) indicated low nitrogen content organic matter in the fjord sediments through glacier runoff, which enhances the abundance and diversity of nitrogen fixing microorganisms.
与热带和亚热带地区相比,北极环境中的固氮作用研究还很不充分。因此,本研究报告了北极峡湾沉积物中固氮生物的丰度和多样性,并阐明了环境因素对固氮生物分布的作用。该研究于北极峡湾 Kongsfjorden 的北极夏季进行,该峡湾位于斯匹次卑尔根岛西海岸。通过定量实时 PCR 测量 nifH 基因的丰度,通过 nifH 靶向克隆文库和下一代序列分析评估固氮生物的多样性。结果表明,表层沉积物中 nifH 基因的丰度范围为 2.3×10 至 3.7×10 拷贝 g。δ-变形菌固氮生物(占总序列的 71%)是本研究中观察到的主要类群。从序列分析中获得的主要属是脱硫弧菌科(占总序列的 25%)、脱硫单胞菌科(占总序列的 18%)和脱硫杆菌科(占总序列的 10%);这些是 Kongsfjorden 沉积物中重要的固氮铁和硫还原细菌类群。nifH 基因的丰度与峡湾沉积物中的总有机碳/总氮比(r=0.96,p≤0.05)和总有机碳(p≤0.05)含量呈显著正相关。较高的总有机碳/总氮比(4.24-14.5)表明峡湾沉积物中通过冰川径流输入的低氮含量有机质增加了固氮微生物的丰度和多样性。