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TAEL 2.0:一种改良的斑马鱼光遗传学表达系统。

TAEL 2.0: An Improved Optogenetic Expression System for Zebrafish.

机构信息

Department of Molecular Cell Biology, University of California Merced, Merced, California, USA.

Optologix, Inc., Dallas, Texas, USA.

出版信息

Zebrafish. 2021 Feb;18(1):20-28. doi: 10.1089/zeb.2020.1951. Epub 2021 Feb 8.

DOI:10.1089/zeb.2020.1951
PMID:33555975
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8020536/
Abstract

Inducible gene expression systems are valuable tools for studying biological processes. We previously developed an optogenetic gene expression system called TAEL that is optimized for use in zebrafish. When illuminated with blue light, TAEL transcription factors dimerize and activate gene expression downstream of the TAEL-responsive C120 promoter. By using light as the inducing agent, the TAEL/C120 system overcomes limitations of traditional inducible expression systems by enabling fine spatial and temporal regulation of gene expression. In this study, we describe ongoing efforts to improve the TAEL/C120 system. We made modifications to both the TAEL transcriptional activator and the C120 regulatory element, collectively referred to as TAEL 2.0. We demonstrate that TAEL 2.0 consistently induces higher levels of reporter gene expression and at a faster rate, but with comparable background and toxicity as the original TAEL system. With these improvements, we were able to create functional stable transgenic lines to express the TAEL 2.0 transcription factor either ubiquitously or with a tissue-specific promoter. We demonstrate that the ubiquitous line in particular can be used to induce expression at late embryonic and larval stages, addressing a major deficiency of the original TAEL system. This improved optogenetic expression system will be a broadly useful resource for the zebrafish community.

摘要

诱导型基因表达系统是研究生物过程的有用工具。我们之前开发了一种光遗传学基因表达系统,称为 TAEL,它针对斑马鱼进行了优化。当用蓝光照射时,TAEL 转录因子二聚化并激活 TAEL 反应性 C120 启动子下游的基因表达。通过使用光作为诱导剂,TAEL/C120 系统克服了传统诱导型表达系统的局限性,能够实现基因表达的精细时空调节。在这项研究中,我们描述了正在努力改进 TAEL/C120 系统。我们对 TAEL 转录激活子和 C120 调节元件都进行了修改,统称为 TAEL 2.0。我们证明,TAEL 2.0 始终能以更快的速度诱导更高水平的报告基因表达,但与原始 TAEL 系统相比,背景和毒性相当。有了这些改进,我们能够创建功能稳定的转基因系,使 TAEL 2.0 转录因子在普遍或组织特异性启动子的控制下表达。我们证明,特别是普遍表达的系可以用于在胚胎晚期和幼虫期诱导表达,解决了原始 TAEL 系统的一个主要缺陷。这个改进的光遗传学表达系统将成为斑马鱼社区广泛有用的资源。

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本文引用的文献

1
Targeted cell ablation in zebrafish using optogenetic transcriptional control.利用光遗传学转录控制在斑马鱼中靶向细胞消融。
Development. 2020 Jun 17;147(12):dev183640. doi: 10.1242/dev.183640.
2
Blue Light Increases Neuronal Activity-Regulated Gene Expression in the Absence of Optogenetic Proteins.蓝光在没有光遗传学蛋白的情况下增加神经元活动调节的基因表达。
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TAEL: a zebrafish-optimized optogenetic gene expression system with fine spatial and temporal control.TAEL:一种经过斑马鱼优化的光遗传学基因表达系统,具有精细的时空控制。
Development. 2017 Jan 15;144(2):345-355. doi: 10.1242/dev.139238. Epub 2016 Dec 19.
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PLoS One. 2014 Sep 23;9(9):e108475. doi: 10.1371/journal.pone.0108475. eCollection 2014.
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