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召唤幽灵:大肠杆菌 FhuF 的结构和功能表征,一种铁载体还原酶。

Conjuring up a ghost: structural and functional characterization of FhuF, a ferric siderophore reductase from E. coli.

机构信息

Instituto de Tecnologia Química e Biológica António Xavier (ITQB‑NOVA), Universidade Nova de Lisboa, Av. da República (EAN), 2780‑157, Oeiras, Portugal.

Université de Nantes, CNRS, CEISAM UMR 6230, 44000, Nantes, France.

出版信息

J Biol Inorg Chem. 2021 May;26(2-3):313-326. doi: 10.1007/s00775-021-01854-y. Epub 2021 Feb 9.

DOI:10.1007/s00775-021-01854-y
PMID:33559753
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8068687/
Abstract

Iron is a fundamental element for virtually all forms of life. Despite its abundance, its bioavailability is limited, and thus, microbes developed siderophores, small molecules, which are synthesized inside the cell and then released outside for iron scavenging. Once inside the cell, iron removal does not occur spontaneously, instead this process is mediated by siderophore-interacting proteins (SIP) and/or by ferric-siderophore reductases (FSR). In the past two decades, representatives of the SIP subfamily have been structurally and biochemically characterized; however, the same was not achieved for the FSR subfamily. Here, we initiate the structural and functional characterization of FhuF, the first and only FSR ever isolated. FhuF is a globular monomeric protein mainly composed by α-helices sheltering internal cavities in a fold resembling the "palm" domain found in siderophore biosynthetic enzymes. Paramagnetic NMR spectroscopy revealed that the core of the cluster has electronic properties in line with those of previously characterized 2Fe-2S ferredoxins and differences appear to be confined to the coordination of Fe(III) in the reduced protein. In particular, the two cysteines coordinating this iron appear to have substantially different bond strengths. In similarity with the proteins from the SIP subfamily, FhuF binds both the iron-loaded and the apo forms of ferrichrome in the micromolar range and cyclic voltammetry reveals the presence of redox-Bohr effect, which broadens the range of ferric-siderophore substrates that can be thermodynamically accessible for reduction. This study suggests that despite the structural differences between FSR and SIP proteins, mechanistic similarities exist between the two classes of proteins.

摘要

铁是几乎所有生命形式的基本元素。尽管铁的含量丰富,但它的生物利用度有限,因此微生物产生了铁载体,这是一种在细胞内合成然后释放到细胞外以摄取铁的小分子。一旦进入细胞,铁的去除不会自发发生,而是由铁载体相互作用蛋白(SIP)和/或铁载体还原酶(FSR)介导。在过去的二十年中,SIP 亚家族的代表已在结构和生化方面得到了表征;然而,FSR 亚家族并没有实现同样的目标。在这里,我们首次对 FhuF 进行了结构和功能表征,FhuF 是第一个也是唯一一个被分离出来的 FSR。FhuF 是一种球形单体蛋白,主要由α-螺旋组成,内部有腔,折叠类似于在铁载体生物合成酶中发现的“手掌”结构域。顺磁共振波谱表明,该核心簇具有与先前表征的 2Fe-2S 铁氧还蛋白一致的电子性质,并且差异似乎仅限于还原蛋白中 Fe(III)的配位。特别是,配位该铁的两个半胱氨酸似乎具有明显不同的键强度。与 SIP 亚家族的蛋白质相似,FhuF 以微摩尔范围结合负载铁和脱铁形式的三羟甲酰基赖氨酸,循环伏安法揭示存在氧化还原-波尔效应,这拓宽了可以热力学上可还原的铁载体底物的范围。这项研究表明,尽管 FSR 和 SIP 蛋白之间存在结构差异,但这两类蛋白在机制上存在相似性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/34a3/8068687/0f0b68e183fd/775_2021_1854_Fig7_HTML.jpg
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