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顺磁共振研究铁硫蛋白:C 检测实验阐明金属中心的近邻环境。

Paramagnetic NMR to study iron sulfur proteins: C detected experiments illuminate the vicinity of the metal center.

机构信息

Magnetic Resonance Center and Department of Chemistry, University of Florence, Via L. Sacconi 6, 50019, Sesto Fiorentino, Italy.

Instituto de Tecnologia Química e Biológica António Xavier (ITQB-NOVA), Universidade Nova de Lisboa, Av. da República (EAN), 2780-157, Oeiras, Portugal.

出版信息

J Biomol NMR. 2023 Dec;77(5-6):247-259. doi: 10.1007/s10858-023-00425-4. Epub 2023 Oct 18.

Abstract

The robustness of NMR coherence transfer in proximity of a paramagnetic center depends on the relaxation properties of the nuclei involved. In the case of Iron-Sulfur Proteins, different pulse schemes or different parameter sets often provide complementary results. Tailored versions of HCACO and CACO experiments significantly increase the number of observed C/C' connectivities in highly paramagnetic systems, by recovering many resonances that were lost due to paramagnetic relaxation. Optimized C direct detected experiments can significantly extend the available assignments, improving the overall knowledge of these systems. The different relaxation properties of C and C' nuclei are exploited in CACO vs COCA experiments and the complementarity of the two experiments is used to obtain structural information. The two [FeS] clusters containing NEET protein CISD3 and the one [FeS] cluster containing HiPIP protein PioC have been taken as model systems. We show that tailored experiments contribute to decrease the blind sphere around the cluster, to extend resonance assignment of cluster bound cysteine residues and to retrieve details on the topology of the iron-bound ligand residues.

摘要

在顺磁中心附近,NMR 相干转移的稳健性取决于所涉及核的弛豫特性。在铁硫蛋白的情况下,不同的脉冲方案或不同的参数集通常提供互补的结果。HCACO 和 CACO 实验的定制版本通过恢复由于顺磁弛豫而丢失的许多共振,大大增加了高顺磁系统中观察到的 C/C'连接的数量。优化的 C 直接检测实验可以大大扩展可用的分配,从而提高对这些系统的整体了解。在 CACO 与 COCA 实验中利用 C 和 C'核的不同弛豫特性,并利用这两个实验的互补性来获取结构信息。含有 NEET 蛋白 CISD3 的两个[FeS]簇和含有 HiPIP 蛋白 PioC 的一个[FeS]簇被用作模型系统。我们表明,定制实验有助于减小簇周围的盲目区域,扩展簇结合半胱氨酸残基的共振分配,并获取有关铁结合配体残基拓扑的详细信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6490/10687126/96caf2636813/10858_2023_425_Fig1_HTML.jpg

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