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本文引用的文献

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Prevalence and drivers of false-positive rifampicin-resistant Xpert MTB/RIF results: a prospective observational study in Rwanda.利福平耐药性Xpert MTB/RIF检测结果假阳性的患病率及驱动因素:卢旺达的一项前瞻性观察研究
Lancet Microbe. 2020 Jun;1(2):e74-e83. doi: 10.1016/S2666-5247(20)30007-0. Epub 2020 Jun 8.
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Targeted next-generation sequencing: a Swiss army knife for mycobacterial diagnostics?靶向新一代测序:用于分枝杆菌诊断的瑞士军刀?
Eur Respir J. 2021 Mar 18;57(3). doi: 10.1183/13993003.04077-2020. Print 2021 Mar.
3
Systematic rifampicin resistance errors with Xpert MTB/RIF Ultra: implications for regulation of genotypic assays.Xpert MTB/RIF Ultra检测利福平耐药性的系统误差:对基因检测方法监管的影响
Int J Tuberc Lung Dis. 2020 Dec 1;24(12):1307-1311. doi: 10.5588/ijtld.20.0396.
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MDR M. tuberculosis outbreak clone in Eswatini missed by Xpert has elevated bedaquiline resistance dated to the pre-treatment era.斯威士兰 Xpert 漏检的耐多药结核分枝杆菌暴发克隆株具有较高的贝达喹啉耐药性,可追溯到治疗前时代。
Genome Med. 2020 Nov 25;12(1):104. doi: 10.1186/s13073-020-00793-8.
5
Transmission of Mycobacterium tuberculosis presenting unusually high discordance between genotypic and phenotypic resistance to rifampicin in an endemic tuberculosis setting.在结核病流行地区,分枝杆菌结核的传播存在基因型和表型对利福平耐药性之间异常高的不协调性。
Tuberculosis (Edinb). 2020 Dec;125:102004. doi: 10.1016/j.tube.2020.102004. Epub 2020 Sep 28.
6
Low-Level Rifampin Resistance and Mutations in Mycobacterium tuberculosis: an Analysis of Whole-Genome Sequencing and Drug Susceptibility Test Data in New York.结核分枝杆菌低水平利福平耐药与突变:纽约全基因组测序与药物敏感性试验数据的分析。
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7
Re: In the name of common sense: EUCAST breakpoints and potential pitfalls. National dissemination of EUCAST guidelines is a shared responsibility.关于:以常识之名:欧洲抗菌药物敏感性试验委员会(EUCAST)的折点及潜在陷阱。在全国范围内传播EUCAST指南是一项共同的责任。
Clin Microbiol Infect. 2020 Dec;26(12):1692-1693. doi: 10.1016/j.cmi.2020.08.008. Epub 2020 Aug 20.
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What is the role of the EUCAST reference method for MIC testing of the Mycobacterium tuberculosis complex?欧盟CAST结核分枝杆菌复合群最低抑菌浓度(MIC)检测参考方法的作用是什么?
Clin Microbiol Infect. 2020 Nov;26(11):1453-1455. doi: 10.1016/j.cmi.2020.07.037. Epub 2020 Aug 6.
9
Interpretation of Discordant Rifampicin Susceptibility Test Results Obtained Using GeneXpert vs Phenotypic Drug Susceptibility Testing.使用GeneXpert与表型药物敏感性检测获得的利福平药敏试验结果不一致的解读
Open Forum Infect Dis. 2020 Jul 5;7(8):ofaa279. doi: 10.1093/ofid/ofaa279. eCollection 2020 Aug.
10
The perceived impact of isoniazid resistance on outcome of first-line rifampicin-throughout regimens is largely due to missed rifampicin resistance.异烟肼耐药对一线利福平全疗程方案结局的影响主要归因于漏检的利福平耐药。
PLoS One. 2020 May 18;15(5):e0233500. doi: 10.1371/journal.pone.0233500. eCollection 2020.

结核菌复合群利福平药敏试验中界定不当的断点的后果

On the Consequences of Poorly Defined Breakpoints for Rifampin Susceptibility Testing of Mycobacterium tuberculosis Complex.

机构信息

Department of Genetics, University of Cambridge, Cambridge, United Kingdom.

FIND, Geneva, Switzerland.

出版信息

J Clin Microbiol. 2021 Mar 19;59(4). doi: 10.1128/JCM.02328-20.

DOI:10.1128/JCM.02328-20
PMID:33568463
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8092724/
Abstract

In a recent report of a systematic review of critical concentrations (CCs), the World Health Organization (WHO) lowered the rifampin (RIF) CC for antimicrobial susceptibility testing (AST) of the complex using Middlebrook 7H10 medium and the Bactec Mycobacterial Growth Indicator Tube (MGIT) 960 system from 1 to 0.5 μg/ml. The previous RIF CC for 7H10 had been in use for over half a century. Because it had served as the reference standard, it contributed to the endorsement of inappropriately high CCs for other AST methods, including the U.S. Food and Drug Administration (FDA)-approved MGIT system. Moreover, this resulted in confusion about the interpretation of seven borderline resistance mutations in (i.e., L430P, D435Y, H445L, H445N, H445S, L452P, and I491F). In this issue of the , Shea et al. (J Clin Microbiol 59:e01885-20, 2021, https://doi.org/10.1128/JCM.01885-20) provide evidence that the CC endorsed by the Clinical and Laboratory Standards Institute for the Sensititre MYCOTB system, which is not FDA approved but is CE-IVD marked in the European Union, is likely also too high. These findings underscore the importance of calibrating AST methods against a rigorously defined reference standard, as recently proposed by the European Committee on Antimicrobial Susceptibility Testing, as well as the value of routine next-generation sequencing for investigating discordant AST results.

摘要

在最近一项关于临界浓度(CC)的系统评价报告中,世界卫生组织(WHO)降低了利福平(RIF)用于复杂分枝杆菌的药敏试验(AST)的 CC 值,使用 Middlebrook 7H10 培养基和 Bactec 分枝杆菌生长指示管(MGIT)960 系统,从 1μg/ml 降低至 0.5μg/ml。此前,7H10 的 RIF CC 已使用了半个多世纪。由于它一直是参考标准,因此导致了其他 AST 方法的不适当高 CC 值得到认可,包括美国食品和药物管理局(FDA)批准的 MGIT 系统。此外,这导致了对 7 个边界耐药突变(即 L430P、D435Y、H445L、H445N、H445S、L452P 和 I491F)的解释产生混淆。在本期的《临床微生物学杂志》中,Shea 等人(J Clin Microbiol 59:e01885-20, 2021, https://doi.org/10.1128/JCM.01885-20)提供了证据,表明临床和实验室标准研究所为 Sensititre MYCOTB 系统推荐的 CC 值可能也过高,该系统虽然未获得 FDA 批准,但在欧盟获得了 CE-IVD 标记。这些发现强调了根据严格定义的参考标准校准 AST 方法的重要性,正如最近欧洲抗菌药物敏感性测试委员会所提出的建议,以及常规下一代测序在调查不一致的 AST 结果方面的价值。