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转录组分析揭示小球藻胞外多糖的可能抗肿瘤机制。

Transcriptome analysis reveals possible antitumor mechanism of Chlorella exopolysaccharide.

机构信息

Guangxi University for Nationalities, School of Marine Sciences and Biotechnology, Guangxi Key Laboratory of Polysaccharide Materials and Their Modification, Nanning 530007, China.

Guangxi Botanical Garden of Medicinal Plants, Nanning 530023, China.

出版信息

Gene. 2021 May 5;779:145494. doi: 10.1016/j.gene.2021.145494. Epub 2021 Feb 13.

Abstract

Microalgae, one of the most important classes of biomass producers, can produce exopolysaccharides similar to bacteria. The exopolysaccharide from Chlorella (CEPS) displays remarkable anticancer activity the mechanism of which remains to be elucidated. In this study, we analyzed the inhibitory effect of CEPS on the growth of HeLa cells. The results showed that CEPS inhibited the proliferation, decreased the viability, and changed the morphology of HeLa cells. Transcriptome analysis showed that 1894 genes were differentially expressed in the CEPS-treated group compared with the control group, including 1076 genes that were upregulated and 818 genes that were downregulated. The results of gene function enrichment analysis showed that the differentially expressed genes (DEGs) were significantly enriched in apoptosis and tumor-related biological processes and participated in several cancer and apoptosisrelated signaling pathways, including the MAPK signaling pathway, TNF signaling pathway, and the PI3K-Akt signaling pathway. The protein-protein interaction network identified 13 DEGs including PTPN11, RSAD2, ISG15, IFIT1, MX2, IFIT2, OASL, OAS1, JUN, OAS2, XAF1, ISG20, and IRF9 as hub genes. Our results suggest that CEPS is a promising therapeutic drug for the follow-up interventional therapy of cancer.

摘要

微藻是最重要的生物质生产者之一,能够产生类似于细菌的胞外多糖。小球藻胞外多糖(CEPS)具有显著的抗癌活性,但作用机制尚不清楚。本研究分析了 CEPS 对 HeLa 细胞生长的抑制作用。结果表明,CEPS 抑制 HeLa 细胞的增殖,降低细胞活力,并改变细胞形态。转录组分析显示,CEPS 处理组与对照组相比有 1894 个基因差异表达,其中 1076 个基因上调,818 个基因下调。基因功能富集分析结果表明,差异表达基因(DEGs)显著富集于凋亡和肿瘤相关的生物学过程,并参与了几个癌症和凋亡相关的信号通路,包括 MAPK 信号通路、TNF 信号通路和 PI3K-Akt 信号通路。蛋白质-蛋白质相互作用网络鉴定出 13 个 DEGs,包括 PTPN11、RSAD2、ISG15、IFIT1、MX2、IFIT2、OASL、OAS1、JUN、OAS2、XAF1、ISG20 和 IRF9,它们作为枢纽基因。我们的结果表明,CEPS 是一种很有前途的治疗药物,可用于癌症的后续介入治疗。

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