Chen Geng, Wang Rendong, Zhang Chen, Gui Lijia, Xue Yuan, Ren Xianlin, Li Zhenli, Wang Sijia, Zhang Zhenxi, Zhao Jing, Zhang Huqing, Yao Cuiping, Wang Jing, Liu Jingfeng
Key Laboratory of Biomedical Information Engineering of Ministry of Education, School of Life Science and Technology, Xi'an Jiaotong University, Xi'an 710049, China.
The United Innovation of Mengchao Hepatobiliary Technology Key Laboratory of Fujian Province, Mengchao Hepatobiliary Hospital of Fujian Medical University, Fuzhou, China.
Comput Struct Biotechnol J. 2021 Jan 16;19:826-834. doi: 10.1016/j.csbj.2021.01.014. eCollection 2021.
Microvascular invasion (MVI) is one of the most important factors leading to poor prognosis for hepatocellular carcinoma (HCC) patients, and detection of MVI prior to surgical operation could great benefit patient's prognosis and survival. Since it is still lacking effective non-invasive strategy for MVI detection before surgery, novel MVI determination approaches were in urgent need. In this study, complete blood count, blood test and AFP test results are utilized to perform preoperative prediction of MVI based on a novel interpretable deep learning method to quantify the risk of MVI. The proposed method termed as "Interpretation based Risk Prediction" can estimate the MVI risk precisely and achieve better performance compared with the state-of-art MVI risk estimation methods with concordance indexes of 0.9341 and 0.9052 on the training cohort and the independent validation cohort, respectively. Moreover, further analyses of the model outputs demonstrate that the quantified risk of MVI from our model could serve as an independent preoperative risk factor for both recurrence-free survival and overall survival of HCC patients. Thus, our model showed great potential in quantification of MVI risk and prediction of prognosis for HCC patients.
微血管侵犯(MVI)是导致肝细胞癌(HCC)患者预后不良的最重要因素之一,手术前检测MVI对患者的预后和生存有很大益处。由于术前仍缺乏有效的MVI无创检测策略,因此迫切需要新的MVI判定方法。在本研究中,利用全血细胞计数、血液检测和甲胎蛋白检测结果,基于一种新的可解释深度学习方法对MVI进行术前预测,以量化MVI风险。所提出的方法称为“基于解释的风险预测”,与目前最先进的MVI风险估计方法相比,它可以精确估计MVI风险并取得更好的性能,在训练队列和独立验证队列中的一致性指数分别为0.9341和0.9052。此外,对模型输出的进一步分析表明,我们模型量化的MVI风险可作为HCC患者无复发生存期和总生存期的独立术前风险因素。因此,我们的模型在量化MVI风险和预测HCC患者预后方面显示出巨大潜力。