Niya Mohammad Hadi Karbalaie, Jeda Ali Salimi, Tavakoli Ahmad, Sohani Hesam, Tameshkel Fahimeh Safarnezhad, Panahi Mahshid, Izadi Morteza, Zamani Farhad, Keyvani Hossein
Gastrointestinal and Liver Diseases Research Center, Iran University of Medical Sciences, Tehran, Iran.
Department of Medical Virology, School of Medicine, Iran University of Medical Sciences, Tehran, Iran.
Iran J Microbiol. 2020 Oct;12(5):495-502. doi: 10.18502/ijm.v12i5.4612.
Respiratory syncytial virus (RSV) is the leading cause of lower respiratory tract infection in many populations, including military recruits receiving basic training. Therefore, this study was set out to determine the molecular epidemiology, genotype and phylogenetic features of RSVs in patients with respiratory infection as a case study.
In this study, military barracks of Tehran, Iran, between January to March 2017 exposed to respiratory diseases were used for sampling. Throat swabs were taken, a reverse transcriptase-polymerase chain reaction (RTPCR) assay was performed to identify RSV and then the genotyping and phylogenetic analyses of RSVs in patients with a respiratory infection.
Among 400 Iranian military trainees with respiratory symptoms, RSV infection was identified in 2.75% (11/400) using RT-PCR. Sequencing showed the incidence of type A (2.5%, n=10) to be much higher than type B (0.25%, n=1); Sore throat was the most common symptom among RSV patients. Phylogenetic analysis revealed that the majority of strains from the studied samples were more consistent with those from the Philippines and the US strains.
This study is the first to document RSV as a major cause of acute respiratory illness among military trainees in Iran. The prevalence of RSV is substantial in the cold season and the prevalence of genotype A is dominant in the country, leading to take essential steps in preparing a preventive vaccine against this viral infection.
呼吸道合胞病毒(RSV)是许多人群下呼吸道感染的主要病因,包括接受基础训练的新兵。因此,本研究作为一项案例研究,旨在确定呼吸道感染患者中RSV的分子流行病学、基因型和系统发育特征。
在本研究中,选取了2017年1月至3月间伊朗德黑兰呼吸道疾病流行的军营进行采样。采集咽拭子,采用逆转录聚合酶链反应(RT-PCR)检测法鉴定RSV,然后对呼吸道感染患者的RSV进行基因分型和系统发育分析。
在400名有呼吸道症状的伊朗军事受训人员中,采用RT-PCR检测出RSV感染率为2.75%(11/400)。测序结果显示,A型(2.5%,n=10)的发生率远高于B型(0.25%,n=1);喉咙痛是RSV患者中最常见的症状。系统发育分析表明,研究样本中的大多数毒株与来自菲律宾和美国的毒株更为一致。
本研究首次证明RSV是伊朗军事受训人员急性呼吸道疾病的主要病因。RSV在寒冷季节的流行率较高,且该国A型基因型的流行率占主导地位,因此有必要采取必要措施制备针对这种病毒感染的预防性疫苗。