Alotaibi Fahad, Alharbi Saif, Alotaibi Majed, Al Mosallam Mobarak, Motawei Mohamed, Alrajhi Abdullah
King Abdulaziz City for Science and Technology (KACST), Riyadh, Saudi Arabia.
Qassim University, Buridah, Qassim, Saudi Arabia.
Saudi J Biol Sci. 2021 Feb;28(2):1433-1444. doi: 10.1016/j.sjbs.2020.11.083. Epub 2020 Dec 3.
Wheat is an important cereal crop, and its significance is more due to compete for dietary products in the world. Many constraints facing by the wheat crop due to environmental hazardous, biotic, abiotic stress and heavy matters factors, as a result, decrease the yield. Understanding the molecular mechanism related to these factors is significant to figure out genes regulate under specific conditions. Classical breeding using hybridization has been used to increase the yield but not prospered at the desired level. With the development of newly emerging technologies in biological sciences i.e., marker assisted breeding (MAB), QTLs mapping, mutation breeding, proteomics, metabolomics, next-generation sequencing (NGS), RNA_sequencing, transcriptomics, differential expression genes (DEGs), computational resources and genome editing techniques i.e. (CRISPR cas9; Cas13) advances in the field of omics. Application of new breeding technologies develops huge data; considerable development is needed in bioinformatics science to interpret the data. However, combined omics application to address physiological questions linked with genetics is still a challenge. Moreover, viroid discovery opens the new direction for research, economics, and target specification. Comparative genomics important to figure gene of interest processes are further discussed about considering the identification of genes, genomic loci, and biochemical pathways linked with stress resilience in wheat. Furthermore, this review extensively discussed the omics approaches and their effective use. Integrated plant omics technologies have been used viroid genomes associated with CRISPR and CRISPR-associated Cas13a proteins system used for engineering of viroid interference along with high-performance multidimensional phenotyping as a significant limiting factor for increasing stress resistance in wheat.
小麦是一种重要的谷类作物,其重要性更多体现在参与全球粮食产品竞争方面。小麦作物面临诸多限制因素,包括环境危害、生物胁迫、非生物胁迫以及重金属因素等,这些因素导致小麦产量下降。了解与这些因素相关的分子机制对于明确特定条件下调控的基因具有重要意义。传统的杂交育种方法虽已用于提高产量,但未达到预期水平。随着生物科学新兴技术的发展,如标记辅助育种(MAB)、数量性状基因座(QTL)定位、诱变育种、蛋白质组学、代谢组学、下一代测序(NGS)、RNA测序、转录组学、差异表达基因(DEG)、计算资源以及基因组编辑技术(如CRISPR cas9;Cas13),推动了组学领域的发展。新育种技术的应用产生了海量数据;生物信息学领域需要取得显著进展以解读这些数据。然而,综合运用组学来解决与遗传学相关的生理问题仍是一项挑战。此外,类病毒的发现为研究、经济和目标确定开辟了新方向。本文进一步探讨了比较基因组学在确定小麦中与抗逆性相关的感兴趣基因、基因组位点和生化途径过程中的重要性。此外,本综述广泛讨论了组学方法及其有效应用。综合植物组学技术已用于与CRISPR及CRISPR相关的Cas13a蛋白系统相关的类病毒基因组,用于构建类病毒干扰,同时高性能多维表型分析是提高小麦抗逆性的一个重要限制因素。