Unité de Chronobiologie théorique, Faculté des Sciences, Université Libre de Bruxelles (ULB), Campus Plaine, CP 231, B-1050 Brussels, Belgium.
Unité de Chronobiologie théorique, Faculté des Sciences, Université Libre de Bruxelles (ULB), Campus Plaine, CP 231, B-1050 Brussels, Belgium.
Biochem Pharmacol. 2021 Sep;191:114482. doi: 10.1016/j.bcp.2021.114482. Epub 2021 Feb 20.
We present ten insights that can be gained from computational models based on molecular mechanisms for the mammalian circadian clock. These insights range from the conditions in which circadian rhythms occur spontaneously to their entrainment by the light-dark (LD) cycle and to clock-related disorders of the sleep-wake cycle. Endogenous oscillations originate spontaneously from transcription-translation feedback loops involving clock proteins such as PER, CRY, CLOCK and BMAL1. Circadian oscillations occur in a parameter domain bounded by critical values. Outside this domain the circadian network ceases to oscillate and evolves to a stable steady state. This conclusion bears on the nature of arrhythmic behavior of the circadian clock, which may not necessarily be due to mutations in clock genes. Entrainment by the LD cycle occurs in a certain range of parameter values, with a phase that depends on the endogenous period of the circadian clock. A decrease in PER phosphorylation is accompanied by a decrease in endogenous period and a phase advance of the clock; this situation accounts for the familial, advanced sleep phase syndrome (FASPS). The mirror delayed sleep phase syndrome (DSPS) can be accounted for, similarly, by an increase in PER phosphorylation and a rise in autonomous period. Failure of entrainment by the LD cycle in the model corresponds to the non-24 h sleep-wake cycle syndrome, in which the phase of the circadian clock drifts in the course of time. Quasi-periodic oscillations that develop in these conditions sometimes correspond to long-period patterns in which the circadian clock is nearly entrained for long bouts of time before its phase rapidly drifts until a new regime of quasi-entrainment is re-established. In regard to jet lag, the computational approach accounts for the two modes of re-entrainment observed after an advance or delay which correspond, respectively, to an eastward or westward flight: the clock adjusts in a direction similar (orthodromic) or opposite (antidromic) to that of the shift in the LD cycle. Computational modeling predicts that in the vicinity of the switch between orthodromic and antidromic re-entrainment the circadian clock may take a very long time to resynchronize with the LD cycle. Repetitive perturbations of the circadian clock due, for example, to chronic jet lag -a situation somewhat reminiscent of shift work- may lead to quasi-periodic or chaotic oscillations. The latter irregular oscillations can sometimes be observed in normal LD cycles, raising the question of their possible relevance to fragmented sleep patterns observed in narcolepsy. The latter condition, however, appears to originate from disorders in the orexin neural circuit, which promotes wakefulness, rather than from an irregular operation of the circadian clock.
我们提出了从哺乳动物生物钟的分子机制计算模型中获得的十个见解。这些见解涵盖了生物钟自发出现的条件,以及其对光-暗(LD)循环的适应和与生物钟相关的睡眠-觉醒周期障碍。内源性振荡自发起源于涉及时钟蛋白(如 PER、CRY、CLOCK 和 BMAL1)的转录-翻译反馈回路。生物钟的振荡发生在由临界值限定的参数域内。在该域之外,生物钟网络停止振荡并演化为稳定的稳态。这一结论与生物钟节律的非节律行为的本质有关,这种行为不一定是由于时钟基因的突变引起的。LD 循环的适应发生在一定的参数值范围内,相位取决于生物钟的内源性周期。PER 磷酸化的减少伴随着内源性周期的减少和时钟相位的提前;这种情况解释了家族性提前睡眠阶段综合征(FASPS)。类似地,通过增加 PER 磷酸化和自主周期的升高,可以解释镜像延迟睡眠阶段综合征(DSPS)。模型中 LD 循环适应的失败对应于非 24 小时睡眠-觉醒周期综合征,其中生物钟的相位随时间漂移。在这些条件下发展的准周期振荡有时对应于长周期模式,其中生物钟在其相位快速漂移之前,长时间近乎适应,直到新的准适应状态重新建立。关于时差反应,计算方法解释了在提前或延迟后观察到的两种重新适应模式,分别对应于向东或向西飞行:时钟调整的方向与 LD 周期的变化相似(顺行)或相反(逆行)。计算模型预测,在顺行和逆行重新适应之间的切换附近,生物钟可能需要很长时间才能与 LD 周期重新同步。例如,由于慢性时差反应(有点类似于轮班工作)导致的生物钟的重复干扰,可能导致准周期或混沌振荡。后者不规则振荡有时可以在正常的 LD 周期中观察到,这引发了它们与嗜睡症中观察到的碎片化睡眠模式的可能相关性的问题。然而,后一种情况似乎源自促进觉醒的食欲素神经回路的障碍,而不是生物钟的不规则运行。