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环二肽合酶与细胞色素 P 酶共同组装的二酮哌嗪的修饰。

Modifications of diketopiperazines assembled by cyclodipeptide synthases with cytochrome P enzymes.

机构信息

Institut für Pharmazeutische Biologie und Biotechnologie, Fachbereich Pharmazie, Philipps-Universität Marburg, Robert-Koch-Str. 4, 35037, Marburg, Germany.

出版信息

Appl Microbiol Biotechnol. 2021 Mar;105(6):2277-2285. doi: 10.1007/s00253-021-11178-1. Epub 2021 Feb 24.

Abstract

2,5-Diketopiperazines are the smallest cyclic peptides comprising two amino acids connected via two peptide bonds. They can be biosynthesized in nature by two different enzyme families, either by nonribosomal peptide synthetases or by cyclodipeptide synthases. Due to the stable scaffold of the diketopiperazine ring, they can serve as precursors for further modifications by different tailoring enzymes, such as methyltransferases, prenyltransferases, oxidoreductases like cyclodipeptide oxidases, 2-oxoglutarate-dependent monooxygenases and cytochrome P enzymes, leading to the formation of intriguing secondary metabolites. Among them, cyclodipeptide synthase-associated Ps attracted recently significant attention, since they are able to catalyse a broader variety of astonishing reactions than just oxidation by insertion of an oxygen. The P-catalysed reactions include hydroxylation at a tertiary carbon, aromatisation of the diketopiperazine ring, intramolecular and intermolecular carbon-carbon and carbon-nitrogen bond formation of cyclodipeptides and nucleobase transfer reactions. Elucidation of the crystal structures of three Ps as cyclodipeptide dimerases provides a structural basis for understanding the reaction mechanism and generating new enzymes by protein engineering. This review summarises recent publications on cyclodipeptide modifications by Ps.Key Points• Intriguing reactions catalysed by cyclodipeptide synthase-associated cytochrome Ps• Homo- and heterodimerisation of diketopiperazines• Coupling of guanine and hypoxanthine with diketopiperazines.

摘要

2,5-二酮哌嗪是最小的环肽,由通过两个肽键连接的两个氨基酸组成。它们可以通过两种不同的酶家族在自然界中生物合成,要么通过非核糖体肽合成酶,要么通过环二肽合成酶。由于二酮哌嗪环的稳定支架,它们可以作为进一步修饰的前体,通过不同的修饰酶,如甲基转移酶、 prenyltransferase、氧化还原酶如环二肽氧化酶、2-酮戊二酸依赖性单加氧酶和细胞色素 P 酶,形成有趣的次生代谢物。其中,环二肽合成酶相关的 Ps 最近引起了人们的极大关注,因为它们能够催化比仅仅通过插入氧更广泛的惊人反应。P 催化的反应包括在叔碳原子上的羟化、二酮哌嗪环的芳构化、环二肽的分子内和分子间碳-碳和碳-氮键形成以及核苷转移反应。三个 Ps 作为环二肽二聚酶的晶体结构阐明为理解反应机制和通过蛋白质工程产生新酶提供了结构基础。这篇综述总结了最近关于 Ps 催化环二肽修饰的出版物。

要点

• 环二肽合成酶相关细胞色素 Ps 催化的有趣反应

• 二酮哌嗪的同型和异型二聚化

• 鸟嘌呤和次黄嘌呤与二酮哌嗪的偶联。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c58/7954767/9991c9204f58/253_2021_11178_Fig1_HTML.jpg

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