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COVID-19疫情湿度依赖分区模型参数估计

Estimation of parameters for a humidity-dependent compartmental model of the COVID-19 outbreak.

作者信息

Farkas Csaba, Iclanzan David, Olteán-Péter Boróka, Vekov Géza

机构信息

Mathematics and Computer Science, Sapientia Hungarian University of Transylvania, Targu Mures, Romania.

Mathematics and Computer Science, Babes-Bolyai University of Cluj-Napoca, Cluj-Napoca, Romania.

出版信息

PeerJ. 2021 Feb 18;9:e10790. doi: 10.7717/peerj.10790. eCollection 2021.

DOI:10.7717/peerj.10790
PMID:33643707
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7897412/
Abstract

Building an effective and highly usable epidemiology model presents two main challenges: finding the appropriate, realistic enough model that takes into account complex biological, social and environmental parameters and efficiently estimating the parameter values with which the model can accurately match the available outbreak data, provide useful projections. The reproduction number of the novel coronavirus (SARS-CoV-2) has been found to vary over time, potentially being influenced by a multitude of factors such as varying control strategies, changes in public awareness and reaction or, as a recent study suggests, sensitivity to temperature or humidity changes. To take into consideration these constantly evolving factors, the paper introduces a time dynamic, humidity-dependent SEIR-type extended epidemiological model with range-defined parameters. Using primarily the historical data of the outbreak from Northern and Southern Italy and with the help of stochastic global optimization algorithms, we are able to determine a model parameter estimation that provides a high-quality fit to the data. The time-dependent contact rate showed a quick drop to a value slightly below 2. Applying the model for the COVID-19 outbreak in the northern region of Italy, we obtained parameters that suggest a slower shrinkage of the contact rate to a value slightly above 4. These findings indicate that model fitting and validation, even on a limited amount of available data, can provide useful insights and projections, uncover aspects that upon improvement might help mitigate the disease spreading.

摘要

构建一个有效且高度可用的流行病学模型存在两个主要挑战

找到一个合适的、足够现实的模型,该模型要考虑到复杂的生物、社会和环境参数,并有效地估计参数值,使模型能够准确匹配现有的疫情数据,做出有用的预测。已发现新型冠状病毒(SARS-CoV-2)的繁殖数随时间变化,可能受到多种因素的影响,如不同的控制策略、公众意识和反应的变化,或者如最近一项研究所表明的,对温度或湿度变化的敏感性。为了考虑这些不断演变的因素,本文引入了一个具有范围定义参数的时间动态、湿度依赖的SEIR型扩展流行病学模型。主要使用意大利北部和南部疫情的历史数据,并借助随机全局优化算法,我们能够确定一个能很好拟合数据的模型参数估计值。随时间变化的接触率迅速下降到略低于2的值。将该模型应用于意大利北部地区的COVID-19疫情,我们得到的参数表明接触率收缩到略高于4的值的速度较慢。这些发现表明,即使基于有限的可用数据进行模型拟合和验证,也能提供有用的见解和预测,揭示那些改进后可能有助于减轻疾病传播的方面。

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本文引用的文献

1
Novel coronavirus 2019-nCoV (COVID-19): early estimation of epidemiological parameters and epidemic size estimates.新型冠状病毒 2019-nCoV (COVID-19):流行病学参数和疫情规模的早期估计。
Philos Trans R Soc Lond B Biol Sci. 2021 Jul 19;376(1829):20200265. doi: 10.1098/rstb.2020.0265. Epub 2021 May 31.
2
Impact of temperature and relative humidity on the transmission of COVID-19: a modelling study in China and the United States.温度和相对湿度对 COVID-19 传播的影响:中国和美国的建模研究。
BMJ Open. 2021 Feb 17;11(2):e043863. doi: 10.1136/bmjopen-2020-043863.
3
A modified model to predict the COVID-19 outbreak in Spain and Italy: Simulating control scenarios and multi-scale epidemics.
一种用于预测西班牙和意大利新冠疫情爆发的改进模型:模拟控制情景和多尺度疫情。
Results Phys. 2021 Feb;21:103746. doi: 10.1016/j.rinp.2020.103746. Epub 2020 Dec 25.
4
The role of environmental factors on transmission rates of the COVID-19 outbreak: an initial assessment in two spatial scales.环境因素对 COVID-19 爆发传播率的影响:两个空间尺度上的初步评估。
Sci Rep. 2020 Oct 12;10(1):17002. doi: 10.1038/s41598-020-74089-7.
5
A discrete stochastic model of the COVID-19 outbreak: Forecast and control.一个 COVID-19 爆发的离散随机模型:预测和控制。
Math Biosci Eng. 2020 Mar 16;17(4):2792-2804. doi: 10.3934/mbe.2020153.
6
Multiple Epidemic Wave Model of the COVID-19 Pandemic: Modeling Study.新冠疫情的多波流行模型:建模研究
J Med Internet Res. 2020 Jul 30;22(7):e20912. doi: 10.2196/20912.
7
A Simulation of a COVID-19 Epidemic Based on a Deterministic SEIR Model.基于确定性 SEIR 模型的 COVID-19 疫情模拟。
Front Public Health. 2020 May 28;8:230. doi: 10.3389/fpubh.2020.00230. eCollection 2020.
8
Maximum Daily Temperature, Precipitation, Ultraviolet Light, and Rates of Transmission of Severe Acute Respiratory Syndrome Coronavirus 2 in the United States.美国最高日温度、降水、紫外线与严重急性呼吸综合征冠状病毒 2 传播率
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9
Optimal policies for control of the novel coronavirus disease (COVID-19) outbreak.控制新型冠状病毒病(COVID-19)疫情的最优策略。
Chaos Solitons Fractals. 2020 Jul;136:109883. doi: 10.1016/j.chaos.2020.109883. Epub 2020 May 16.
10
Effects of temperature variation and humidity on the death of COVID-19 in Wuhan, China.温度变化和湿度对中国武汉 COVID-19 死亡的影响。
Sci Total Environ. 2020 Jul 1;724:138226. doi: 10.1016/j.scitotenv.2020.138226. Epub 2020 Mar 26.