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亚种的完整叶绿体基因组。 (你提供的原文不完整,请补充完整内容以便更准确翻译。)

The complete chloroplast genome of subsp. .

作者信息

Zhang Gang, Sun Jing, Li Yimin, Zhang Dawei, Peng Liang, Tang Zhishu, Shi Linchun

机构信息

Key Laboratory for Chinese Medicine Basis & New Drugs Research, College of Pharmacy and Shaanxi Provincial, Shaanxi University of Chinese Medicine, Xi'an, China.

Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.

出版信息

Mitochondrial DNA B Resour. 2016 Mar 24;1(1):191-192. doi: 10.1080/23802359.2015.1137838.

DOI:10.1080/23802359.2015.1137838
PMID:33644341
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7871656/
Abstract

The complete chloroplast genome of subsp. ., an important traditional Chinese herbal medicine, was sequenced and characterized in this study. The genome size is 152 682 bp in length with 38.42% GC content. Two inverted repeats (25 653 bp) are separated by a large single copy (84 398 bp) and a short single copy (16 978 bp). The genome contains 130 individual genes, including 85 protein-coding genes, 37 tRNA genes and 8 rRNA genes. Twenty-one genes contain one or two introns. Phylogenetic tree analysis of subsp. and other 12 species belonging to using MEGA6 with the neighbour-joining algorithm revealed that the chloroplast genome was clustered in subfamily .

摘要

本研究对重要的传统中药材[具体亚种名称未给出]的完整叶绿体基因组进行了测序和特征分析。基因组长度为152682 bp,GC含量为38.42%。两个反向重复序列(25653 bp)被一个大单拷贝(84398 bp)和一个小单拷贝(16978 bp)隔开。该基因组包含130个独立基因,包括85个蛋白质编码基因、37个tRNA基因和8个rRNA基因。21个基因含有一个或两个内含子。使用MEGA6和邻接法对[具体亚种名称未给出]和其他12个属于[所属属名称未给出]的物种进行系统发育树分析,结果表明叶绿体基因组聚类在亚科[亚科名称未给出]中。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ff6f/7871656/62095c8be531/TMDN_A_1137838_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ff6f/7871656/62095c8be531/TMDN_A_1137838_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ff6f/7871656/62095c8be531/TMDN_A_1137838_F0001_B.jpg

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Mol Biol Evol. 2013 Dec;30(12):2725-9. doi: 10.1093/molbev/mst197. Epub 2013 Oct 16.
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Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads--a baiting and iterative mapping approach.
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Nucleic Acids Res. 2013 Jul;41(13):e129. doi: 10.1093/nar/gkt371. Epub 2013 May 9.
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OrganellarGenomeDRAW--a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets.细胞器基因组绘图软件--一套用于生成质体和线粒体基因组物理图谱以及可视化表达数据集的工具。
Nucleic Acids Res. 2013 Jul;41(Web Server issue):W575-81. doi: 10.1093/nar/gkt289. Epub 2013 Apr 22.
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Complete chloroplast genome of the genus Cymbidium: lights into the species identification, phylogenetic implications and population genetic analyses.蝴蝶兰属植物完整叶绿体基因组:物种鉴定、系统发育意义和种群遗传分析的启示。
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